Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02887 ATGGAGAGCAGTGCGGCCATGGATGTTGAGGAGCAACCTTCACCCAATTCCACCAACGTAAAACGATTCGGCCTTAAAAACTCTATTCAAACCAACTTCGGCGATGACTATGTTTTCCAAATTGTCCCAAAGGATGATTGGAGTGCAATGGCGGTTTCACTGTCAACGAGCGCAGTGAAACTATATTCACCTATGGCGGGTCAATATTTCGGAGAGTGCAAGGGTCACACCGCAACCATCAACCAGATTTTATTTTCGGGTCCTTCACACCACCAAGTTTTGTGTTCGTGCTCTTCTGACGGCACTATTAGAGCTTGGGACACACGCACATTTCAGCAGGTTTCTTGCATCAATGCGGGTTCTTCGCAGGAGGTTTTCAGCTTCTGTCTTGGAGGAACTAGTGGGAATTTAGTTGCCGCCGGGTGTAAATCGCAGTTTGAGTTTGCTCAGATACTGTTCTGGGATTGGAGAAATATGAAGCAAATTGCATGCCTGGAAGACTCTCATGTAGATGATGTCACTCAGGTTCATTTTGTCCCCAACGAACAAGGAAAGCTTATTTCTGCTTCAGTAGATGGGTTGATCTGCACGTTTGATACCACTGGAGATATCAATGATGATGATCATCTAGAGTCAGTGATTAATATGGGGACTTCAATTGCAAAGGTGGGGATTTTTGGAGAGAGTTACCAGAAGCTTTGGTGTTTAACACATATTGAAACCCTAGGGTACAGTGAATCTCCATTACTTGTGTTTTTCTTAAGTCCTATTAGTTATTCAAAGCTTACCCATGCTCTATTTCTGCCTGCTATGGTTGTATTCTGCACTTTCAATTTTGTTACTGTTACTGGAGAAAGTATCTGGAACTGGAAAGATGGTAGAAATGAAGGAAACTTCTCAGATGCACGTACTTTAGCTTCTGAAAGTTGGAATTTGGACCATGTTGATTATTTCATCGATTGCCACTACTACAGAGAATCTGAAAAACTATGGGTGATTGGTGGCACTAATGGTGGTACTATGGGCTACTTTCCTGTAAATTACAAAGGAGTGGCAACAATTGGAGGTGCAGAAGCAATTCTTGAAGGTGGGCACACAGGTGTTATTAGGAGTGTTTTACCAATGTCAAAAATTCATTCTAACAGTCCTAGCCAAGGCATTTTTGGATGGTCTGGTGGAGAAGATGGTCGGCTATGTTGTTGGCTATCTGATGATTCCTCTGAATCAAATCGATCTTGGATTTCAAGCACATTGATTATGAGGCCAGAAAAAGCTCGCAAGAAAAATCGTCATCAACCCTACTAG 1305 0.4261 MESSAAMDVEEQPSPNSTNVKRFGLKNSIQTNFGDDYVFQIVPKDDWSAMAVSLSTSAVKLYSPMAGQYFGECKGHTATINQILFSGPSHHQVLCSCSSDGTIRAWDTRTFQQVSCINAGSSQEVFSFCLGGTSGNLVAAGCKSQFEFAQILFWDWRNMKQIACLEDSHVDDVTQVHFVPNEQGKLISASVDGLICTFDTTGDINDDDHLESVINMGTSIAKVGIFGESYQKLWCLTHIETLGYSESPLLVFFLSPISYSKLTHALFLPAMVVFCTFNFVTVTGESIWNWKDGRNEGNFSDARTLASESWNLDHVDYFIDCHYYRESEKLWVIGGTNGGTMGYFPVNYKGVATIGGAEAILEGGHTGVIRSVLPMSKIHSNSPSQGIFGWSGGEDGRLCCWLSDDSSESNRSWISSTLIMRPEKARKKNRHQPY 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02887 434 ProSiteProfiles Trp-Asp (WD) repeats profile. 73 116 IPR001680 GO:0005515
Vian2g02887 434 SMART WD40_4 110 155 IPR001680 GO:0005515
Vian2g02887 434 SMART WD40_4 158 199 IPR001680 GO:0005515
Vian2g02887 434 SMART WD40_4 66 107 IPR001680 GO:0005515
Vian2g02887 434 MobiDBLite consensus disorder prediction 1 21 - -
Vian2g02887 434 ProSitePatterns Trp-Asp (WD) repeats signature. 94 108 IPR019775 -
Vian2g02887 434 Gene3D - 8 218 IPR015943 GO:0005515
Vian2g02887 434 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 49 401 IPR011047 -
Vian2g02887 434 PANTHER UNCHARACTERIZED 18 434 IPR039328 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02887 K24758 - gmx:100794786 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02887 2 49671914 49676074 Vian2g02887 2 49671914 49676074 ECH