Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02876 ATGGATTTAGATTTTGAATATCACGAAGAATACAGAAGAAACTCAAGGGGAGTGCAACTTTTCACCTGTAAATGGTTACCTTCATCTTCTCCCATGGGTCTGGTTTTCCTTTGCCATGGTTATGGCATGGAGTGCAGTGGCTTCATGAGAGAATGTGGTGTAAGACTAGCGTGTGCTAAATATGCCGTGTACGGTATCGATTATGAAGGGCATGGACGTTCTGAAGGTGCTCGTTGTTACATAAAGAAGTTCGATAACATCGTTAATGATTGTTATGACTTTTTCAAGTCTGTCGGCGAGCTCCAAGAGTATAAGGGGAAGGCTAGGTTCTTGTATGGAGAGTCCATGGGAGGGGCAGTGAGCCTACTTTTGCACAGAAAGGACCCTTCATTCTGGGACGGTGCAGTTCTTGTTGCGCCAATGTGTAAGATATCAGAGAAAGTGAAGCCACACCCGGTGGTGATCAACTTATTGACTAAAGTGGAAGATATAATCCCAAAGTGGAAGATAGTTCCCACTAAGGATGTCATCAATGCAGCCTTCAAAGACCCTGCTAAAAGAAAGAGGATAAGGAAAAACAAGTTGATATACCAGGACAAGCCCAGGCTAAAAACAGCACTGGAAATGTTAAGAACCAGCATGAGCCTAGAAGACAGCTTATATAAGGTGACCCTGCCTTTTTTTGTACTGCATGGAGAAGCAGATACAGTGACCGACCCAGAAATAAGCAGGGAATTATATGAGAGGGCAAGTAGCAAAGATAAGACCATAAAATTGTACCCAGGAATGTGGCATGGCTTAACATCAGGGGAGACGGATGAGAACATCGAAAAAGTTTTTGAAGACATTATAATGTGGCTAGATAAGCACACGGGCAATCCAACTCATGCTTCTACACAACAAATTGAGACTTATAAGTATGACATTGAGAGATTGACTACAGTTACATCGTCAGCAAAGTTTGTAAAGCAAGAAAACGGGCGAAGAAGCTATCTCTGTGGCTTGAAAGGAAACCGCTTGTTATACCACTCAGCAATTTAG 1041 0.4265 MDLDFEYHEEYRRNSRGVQLFTCKWLPSSSPMGLVFLCHGYGMECSGFMRECGVRLACAKYAVYGIDYEGHGRSEGARCYIKKFDNIVNDCYDFFKSVGELQEYKGKARFLYGESMGGAVSLLLHRKDPSFWDGAVLVAPMCKISEKVKPHPVVINLLTKVEDIIPKWKIVPTKDVINAAFKDPAKRKRIRKNKLIYQDKPRLKTALEMLRTSMSLEDSLYKVTLPFFVLHGEADTVTDPEISRELYERASSKDKTIKLYPGMWHGLTSGETDENIEKVFEDIIMWLDKHTGNPTHASTQQIETYKYDIERLTTVTSSAKFVKQENGRRSYLCGLKGNRLLYHSAI 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02876 346 PRINTS Alpha/beta hydrolase fold signature 60 75 IPR000073 -
Vian2g02876 346 PRINTS Alpha/beta hydrolase fold signature 227 241 IPR000073 -
Vian2g02876 346 PRINTS Alpha/beta hydrolase fold signature 111 124 IPR000073 -
Vian2g02876 346 FunFam Alpha/beta-Hydrolases superfamily protein 2 294 - -
Vian2g02876 346 PANTHER PHOSPHOLIPASE-RELATED 11 290 - -
Vian2g02876 346 SUPERFAMILY alpha/beta-Hydrolases 8 292 IPR029058 -
Vian2g02876 346 Gene3D alpha/beta hydrolase 6 298 IPR029058 -
Vian2g02876 346 Pfam Serine aminopeptidase, S33 30 270 IPR022742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02876 Vian-Chr2 49593333 49597814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02876 48 346 Acyl Lipid Metabolism Gene Families AT2G47630 64.821 2.53e-148 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02876 K18368 - cave:132171090 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02876 2 49593333 49597814 Vian2g02876 2 49593333 49597814 ECH