LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian2g02875	ATGAAGCTTAAAGAGATGGGGGGAGGTAACTGGAAAAATCAGAAGTCGAAGAAGAAGCAAAACTTACAACGGCAGAAGAGAGGCCCTCGTTTGCCTTCTTCTTTGCAAAAGCAGATTGACCGTTTAAACCCTACAACTCCCTTAGAGAGTGCCGATTCTGACGACAACGACCTTTACGAATACGAGGAAGAGAGGGCAGAGGAAGAGTCTAGGAAAAATAAGCGTTACGACCCTGTTTCGGTTAATGATGACCTCTCTGAAGAAATTGAGGATGAGAATGTGCAGTCTGATGATGAAAGTGGGGACAGTGATTACATTGGGACAAAGAAGGATGAAAATGTTCAAAGTGATGATTCTGGAGAAGAAGATGATGGGAGGCATGCAAGGATGCTACAAGCAATTACTGGTATGCCTAGTGAGGCTTTTGAAGAGAATAAGAAGAAAAAGAAGACGATGAATGACTTTGTTATCCCAGAGCTATATCCAGGACCTGAATATAATCCTAGTCGTGATGTTGGGGAAGGTAATGCACGTATTAGCATAGAGGACCTACTGAATCCTCTTAGTGAAAAGCCGACTTATGGAAAACTTCGGAAGAGACAGCTTCAAATTATGAAGCATGGTAGAATTGTTCATGCGCCACTTTCAAAGGCAGTTCAAGCAAAGGTAGAGAGGACAGCAGCCTATGAAGTATCAAAGAAAGATGTCAGCAAGTGGCAGCATATTATTCAGAGAAATAGAGAGGCTCCAACTATTTTCTTTGATGAAGATGTGAATCTAGGATTTTCAACTGTAGGAGCAATAGCTTCTGAATTTGAACCCAGAACTGAATTTGAGAAGAAAATAGCTGCACTAGTTTATGACAATGAAGTAACGGATGCCCATAAAAATGATGGTTCTAAGCTTCTTGAAATGAACAAGGTGTCTATTGAAGATGAGAAAGATAGACAAAATCGGATTGCTAAAATGCGGAGCCTTCTTTTTCGTCATGAAATGAAGGCAAAGCATATTAAAAAGATCAAGTCCAGGACATTTCATCGTTTGTTGAAGAAAGATAGGTTTAAAGCAGAAGCTTCTCAGATACAAATGGACCCCGAAGCTGCTAAAGAACATGCCATGAAACGAGAGCGTGAAAGGGCCGAGGAACGTATGACTCTAAAACACAAAAACCAGAATCGGTGGGCTAAGCGGATTATACAACGTGGCTTAAATAGCCAAGATGAAGGAACACGCGCGGCTATAGCTGAACAACATCAAAGACATGCTGAATTGACTAGAAAAATGCACTCTATGAAGGATAGCAGCAGTAGCAGTGAAGATACCAGTGATGAGGATGACTTTGAAAACTCTGCTGGTTCTGATCAGGAGAGGGCTTACAAGCTTTTGGGAAAAGCTAGAGATAAAACCATGAAAGTGTTGGAGGAAGAGAATGAAGTTCCCAAATCAGGATTGCTTTCTTTGCCTTTTATGAGGCGCGGATTGGAGAAAAGAAGAGAGGAAGCTGTTGAAGAAGCTAACCTTGCTTTCCAAGAATATGAAGATTCCTTGAAGAAACTGGAAAATTCTGGTAGCTTAGAAGATCCAAAAGCTGCTTCTACCAGTGGTCGAAAAGTATTTGGACCAGCCAAAGCTCAAATATCTGATACCAGTGTTAAGGTAAAATCATATAATAGCTATGGTGGCAGTGATAGTGAGGATGACTTGGGAATCGGCAAAAGTGACAACATGGAGAATATGGGAAGTCACCTTTTGCATAACAAGGATTCAGTTGTAATTCAAGAAGACACTGATACTCACAAGGAATCTTTGTTGAAGACCATTGATGATATTATTGAAAATCCTGGGCCAAAAACTACATGTGAAGTTTCCATATTTGTGTCAGATCAGTGGAAAAAGGCAAAGAACAAAAATGAAAACACAACTATCAAGAAGTCTCCAAACCTTACAGGGCCAGTTAGGCAAAATAAAAAAGATGCTGAAAAGGAAATTGGAGAGGATAGTGATACCGATAGTGTAGGGCAGATGGTGGATGGAATTCTGTCTTCTGTTTCTAAAGTGCCTTATGAACTTCCTTCTCAAGAGGAGCTCATTCGGCAAGCGTTTGCAGGGGATGATGTAGAAGGGGATTTTGAAAAGGACAAGCAGGAGATCCTCGAGGAAGAAAATCCTGAGCCAGAAAAGCCTCTGTTACTTCCTGGCTGGGGCCAGTGGACACATATACAGGAAAAGAAAGGTTTACCATCTTGGATGCTGAAAAAACATGAAGATGCCCAGAAAAAAAGGGCAGAGGCACTCAAAAAGAGGAAGGATGCTCAGCTTAAAAACGTGATTATATCTGAAAAGATAGATAAGAAGGCTGAAAAACTGCATACTAAATCACTGCCTTTCCCGTTTACTTCCAAAGAGGTGTTTGAACAGAGCATGCGTGTGCCCATCGGACCTGAATTTAATCCAGCAACTGCAATTGGTCCTCTTACCCGACCCGAAGTGGTGAAGAAACCAGGTGTTATAATAAAGCCAGTGGAGTTTGAAGACGTGAATCCTCATGAAAAATCAGAACAACGAAGTGGTGATAAGCGAAAGTTTAAGAAAACTAGTGGCAAACCCGTGAAAAAGGCGAAAGTTGGAGGAAAAAAATAA	2640	0.4114	MKLKEMGGGNWKNQKSKKKQNLQRQKRGPRLPSSLQKQIDRLNPTTPLESADSDDNDLYEYEEERAEEESRKNKRYDPVSVNDDLSEEIEDENVQSDDESGDSDYIGTKKDENVQSDDSGEEDDGRHARMLQAITGMPSEAFEENKKKKKTMNDFVIPELYPGPEYNPSRDVGEGNARISIEDLLNPLSEKPTYGKLRKRQLQIMKHGRIVHAPLSKAVQAKVERTAAYEVSKKDVSKWQHIIQRNREAPTIFFDEDVNLGFSTVGAIASEFEPRTEFEKKIAALVYDNEVTDAHKNDGSKLLEMNKVSIEDEKDRQNRIAKMRSLLFRHEMKAKHIKKIKSRTFHRLLKKDRFKAEASQIQMDPEAAKEHAMKRERERAEERMTLKHKNQNRWAKRIIQRGLNSQDEGTRAAIAEQHQRHAELTRKMHSMKDSSSSSEDTSDEDDFENSAGSDQERAYKLLGKARDKTMKVLEEENEVPKSGLLSLPFMRRGLEKRREEAVEEANLAFQEYEDSLKKLENSGSLEDPKAASTSGRKVFGPAKAQISDTSVKVKSYNSYGGSDSEDDLGIGKSDNMENMGSHLLHNKDSVVIQEDTDTHKESLLKTIDDIIENPGPKTTCEVSIFVSDQWKKAKNKNENTTIKKSPNLTGPVRQNKKDAEKEIGEDSDTDSVGQMVDGILSSVSKVPYELPSQEELIRQAFAGDDVEGDFEKDKQEILEEENPEPEKPLLLPGWGQWTHIQEKKGLPSWMLKKHEDAQKKRAEALKKRKDAQLKNVIISEKIDKKAEKLHTKSLPFPFTSKEVFEQSMRVPIGPEFNPATAIGPLTRPEVVKKPGVIIKPVEFEDVNPHEKSEQRSGDKRKFKKTSGKPVKKAKVGGKK	879

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian2g02875	879	Pfam	Utp14 protein	129	843	-	-
	Vian2g02875	879	MobiDBLite	consensus disorder prediction	861	879	-	-
	Vian2g02875	879	MobiDBLite	consensus disorder prediction	635	673	-	-
	Vian2g02875	879	MobiDBLite	consensus disorder prediction	413	438	-	-
	Vian2g02875	879	MobiDBLite	consensus disorder prediction	1	125	-	-
	Vian2g02875	879	MobiDBLite	consensus disorder prediction	26	52	-	-
	Vian2g02875	879	MobiDBLite	consensus disorder prediction	847	879	-	-
	Vian2g02875	879	MobiDBLite	consensus disorder prediction	83	99	-	-
	Vian2g02875	879	Coils	Coil	491	522	-	-
	Vian2g02875	879	MobiDBLite	consensus disorder prediction	102	125	-	-
	Vian2g02875	879	MobiDBLite	consensus disorder prediction	366	390	-	-
	Vian2g02875	879	MobiDBLite	consensus disorder prediction	654	668	-	-
	Vian2g02875	879	PANTHER	U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14	13	860	IPR006709	GO:0006364\|GO:0032040
	Vian2g02875	879	MobiDBLite	consensus disorder prediction	367	389	-	-
	Vian2g02875	879	MobiDBLite	consensus disorder prediction	550	574	-	-
	Vian2g02875	879	MobiDBLite	consensus disorder prediction	403	457	-	-
	Vian2g02875	879	Coils	Coil	754	774	-	-
	Vian2g02875	879	MobiDBLite	consensus disorder prediction	65	82	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian2g02875	Vian-Chr2	49576148	49582241	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vian2g02875	K14567		-	gmx:100811431	1332.39

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vian2g02875	2	49576148	49582241	Vian2g02875	2	49576148	49582241	ECH