Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02872 ATGAACACTAGGTGTTCGATGATACTTCTTTGCATACTGGCTTATGCCTATGTTTCCGTTTCAGAGAAATTATCAGCGTACGACGTTCTTGAGAAATATGGCCTTCCAGTGGGTCTTCTTCCCAAAGGTGTGACAGAGTACGAGCTAAACGAAAAAAACGGCCACTTCACTGCGTATCTGGAGCAAACATGCTATTTCAGCGTACAATCGTATGACCTAAAGTACAAGTCCACCATCAAGGGCATGATCTCGAAGGGGAAGCTGTCGAAGCTGAAAGGTGTTAGCGTGAAAATCGAGGTGCTGTGGATCCCAATCTCTGAGGTCACTCGCGACGGTGATGACCTCAAATTCTCTGCCGGCGTTGCATCTGCCGGTTTTAGCGCAGACAGCTTTTCGGAGAGCCCTCAGTGTGGATGTGGATTCGATTGTGAGAATTTCAACCAGAACGGTGACGTTTCTTCTTCTCTACAGATTTAA 477 0.4675 MNTRCSMILLCILAYAYVSVSEKLSAYDVLEKYGLPVGLLPKGVTEYELNEKNGHFTAYLEQTCYFSVQSYDLKYKSTIKGMISKGKLSKLKGVSVKIEVLWIPISEVTRDGDDLKFSAGVASAGFSADSFSESPQCGCGFDCENFNQNGDVSSSLQI 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02872 158 SUPERFAMILY At5g01610-like 7 143 IPR036758 -
Vian2g02872 158 PANTHER T31J12.3 PROTEIN-RELATED 18 138 IPR007493 -
Vian2g02872 158 Pfam Protein of unknown function, DUF538 26 131 IPR007493 -
Vian2g02872 158 Gene3D - 14 137 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02872 Vian-Chr2 49560106 49560582 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02872 - - vum:124824334 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02872 2 49560106 49560582 Vian2g02872 2 49560106 49560582 ECH