Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02871 ATGCTTTCCTCCAAACCACCGCGTCGGAAAATTGTTCCGGCGAACGGAGATGAGTCCGCTGACAAACTGGACCAGCTTCTCTTGTCCTCCGCCATCTGCAACAATGAGGACATAGGCCCGTTCATCCGCAAGGCCTTCGCCTCCGGAAAGCCAGAGACGCTCCACCACCACCTCCGTCACTTTGCGCGCTTGAAGGAGTCCGAGATTGAGGAAGTGTGCAAGGCTCACTACCAGGACTTTATCCTCGCCGTTGACGATCTACGATCCCTCCTATCAGACGTCGATTCGCTGAAGTCCTCCCTCTTCGATTCCAACTCGCGGCTCCAGTCCGTTGCGCGCCCGCTCCTGTCGTCTCTCGACTCCTTCGTCGAGACGCGGAACGTCTCGAAGAACGTGAACCTCGCCATCGACTCCATCCGCACTTGCGTTAAGCTGATGGAGGTTTGCACGCGCGCCAACCGCCACCTCGCGGACGACAACTTCTACATGGCACTGAAGTGCGTGGACGCGATCGAGCGGGAGTATTTGGATAAAACGGAGTCATCCACGCTGAAGCGGATGCTGGAGAAGAAGATTCCAGAGATTCGATCGTACATCGAAAGGAAGGTGAACAAGGAGTTTGGGGACTGGTTGGTGGAGATCCGAGTCGTGAGTCGCAATTTAGGTCAATTGGCGATAGGTCAAGCCTCGTCAGCGAGGCAGAGAGAAGAGGATCTAAGAATTAAGCAGCGCCAAGCGGAGGAACAGAGTAGACTCAGCGTGAGGGACTGTATATACGCTTTAGAGGAAGAGGAAGAAGACGAAATTATCGCTGGCGGGATCGGCGAAGACGGCGGTGGAGTCGCCGGGTTTGATTTGACTTCGTTGTACAGGGCATACCATATTCATCAGACTTTAGGGTTAGAGGATCGGTTTAAGCGGTATTATTTCGAGAACCGGAAGCTTCAGTTGACTTCGGACTTTCAGGTCTCGTCGATGACTCCTTTTCTGGAGTCGCATCAAACGTTCTTTGCGCAGATTGCAGGGTTCTTTGTGGTGGAGGATCGCGTGTTCAGAACCGGAGGTGGGTTGATTTCAAAATTGGAGGTTGAGAATCTGTGGGAGATTGCTGTTAGTAAGATGTGTTCAGTGTTGGAGGATCAGTTCTCCAGAATGCAAACTGCTAATCATCTTTTGCTTATTAAGGATTATGTGAGTCTGTTAGGGGTAACCCTGCGACGATACGGGTACCCCATTGATGCGTTGCTTGATGTTTTGAGCAAACACAGGGATAAGTACCACGAACTTCTTTTGTCTGATTGTAGGAAGCAGATTGCGGAGGCGGTTGCGGCTGATAAATTTGAGCAAATGCTGATGAAAAAAGAGTATGAGTATTCCATGAATGTGCTTTCTTTCCAGATACAGACTACTGATATCATACCAGCTTTTCCCTATGTTGCCCCCTTTTCGACCACTGTGCCAGATTGTTGTCGGATTGTACGGTCATTCATTGAGGATTCTGTGAGTTTCATGTCTTATGGCGGGCAGCTTGAGTTCTATGAAGTTGTTAAGAAATATTTAGACAGGCTTTTGATTGAGGTTTTGGATGAAGCTTTAGTGAAGCTTATCAATACCTCGATTAGTGGTGTCTCCCAGGCAATGCAAATGGCAGCGAATATGGCTGTCTTGGAGCGTGCTTGTGATTTTTTCTTTCGCCATGCTGCACAGCTTTCGGGTGTTCCCTTGAGAATGGTGGAGAGAAGCAGAAGGCAGTTTCCCCTAAGAAAAGCTCGTGATGCTGCAGAAGAGATGCTCTCTGGGCTACTCAAAGCCAAGGTTGATGGATTTATGACCTTGATCGAGAATGTAAATTGGATGTGTGATGAGGCACCTCAGAGTGGAAATGAATATGTAAATGAGGTTATAATTTATTTAGAAATTTTGGTTTCAACTGCTCAACAGATATTGCCATCTCAAGTCCTTAAGAGAGTATTGCAAGAAGTTTTTGCTCACATATCCGACAAGATAGTTGGGACTTTAGTCAGTGATTCTGTTAAAAGGTTTAATGTCAATGCTATTAATGGAATTGAAGTAGATATTCGGCTCTTAGAATCATTTGCTGATAATCAGGCCTCTCTTTTCTCTGATGGGGATGTTGATGTTTTGAAAGCATCACTTACCAGTTCAAAGCAACTGATTAATTTGCTATTGAGTAATCATCCAGAGAACTTCTTGAATCCAGTGATAAGGGAGAGGAGTTACAACACTTTGGACCACAAGAAAGTGGTGATTGTTTCAGAAAAGTTGAGGGATCCTTCAGATCGGCTCTTTGGAACCTTTGGTAGTCGTGGGGCCAGGCAGAATCCGAAAAGGAAATCGTTGGATACGTTGATAAAAAGACTTAAGGATGTTAGCTGA 2397 0.4698 MLSSKPPRRKIVPANGDESADKLDQLLLSSAICNNEDIGPFIRKAFASGKPETLHHHLRHFARLKESEIEEVCKAHYQDFILAVDDLRSLLSDVDSLKSSLFDSNSRLQSVARPLLSSLDSFVETRNVSKNVNLAIDSIRTCVKLMEVCTRANRHLADDNFYMALKCVDAIEREYLDKTESSTLKRMLEKKIPEIRSYIERKVNKEFGDWLVEIRVVSRNLGQLAIGQASSARQREEDLRIKQRQAEEQSRLSVRDCIYALEEEEEDEIIAGGIGEDGGGVAGFDLTSLYRAYHIHQTLGLEDRFKRYYFENRKLQLTSDFQVSSMTPFLESHQTFFAQIAGFFVVEDRVFRTGGGLISKLEVENLWEIAVSKMCSVLEDQFSRMQTANHLLLIKDYVSLLGVTLRRYGYPIDALLDVLSKHRDKYHELLLSDCRKQIAEAVAADKFEQMLMKKEYEYSMNVLSFQIQTTDIIPAFPYVAPFSTTVPDCCRIVRSFIEDSVSFMSYGGQLEFYEVVKKYLDRLLIEVLDEALVKLINTSISGVSQAMQMAANMAVLERACDFFFRHAAQLSGVPLRMVERSRRQFPLRKARDAAEEMLSGLLKAKVDGFMTLIENVNWMCDEAPQSGNEYVNEVIIYLEILVSTAQQILPSQVLKRVLQEVFAHISDKIVGTLVSDSVKRFNVNAINGIEVDIRLLESFADNQASLFSDGDVDVLKASLTSSKQLINLLLSNHPENFLNPVIRERSYNTLDHKKVVIVSEKLRDPSDRLFGTFGSRGARQNPKRKSLDTLIKRLKDVS 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02871 798 FunFam Exocyst complex component 412 580 - -
Vian2g02871 798 Pfam Exocyst complex subunit Sec15-like 458 762 IPR046361 -
Vian2g02871 798 PIRSF Sec15 4 798 IPR007225 GO:0006886|GO:0090522
Vian2g02871 798 PANTHER SEC15 15 796 IPR007225 GO:0006886|GO:0090522
Vian2g02871 798 Gene3D Dsl1p vesicle tethering complex, Tip20p subunit, domain D 590 737 IPR042044 -
Vian2g02871 798 FunFam Exocyst complex component 590 737 - -
Vian2g02871 798 Gene3D - 412 584 IPR042045 -
Vian2g02871 798 Coils Coil 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02871 Vian-Chr2 49553546 49555942 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02871 K19985 - gmx:100796432 1453.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02871 2 49553546 49555942 Vian2g02871 2 49553546 49555942 ECH