Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02867 ATGGATCACTCTGCAAAACTCCTGTGGGTGTTGGGTCTATGCGTGGCTGTAATGGCACAGCAGGCAGCTGCAGTGGAGCTATTGAAAGGAAACCTTATTGGCGGAAAGGAAACACCAACAGGAAAGACTCTGATCAACAAGGTATGTTCAGCGTCCCCAACCAAAGACCTCTGCGTTCAGGTCCTCTCTTCTGATGCACTAAGCACCACCGCAAACCTCAAAGAATTGGCAATCATTTCCCTTAGGGTTGCTGCCAGAAACGCTTCTGGCATCCTCGCCGACACCAAAGTTCTCATCGATGACGACGAACTTGACCCTGATGTCCAACAAGGTTTGGCTGATTGCAAGGAGAACATCTTGGACGCAGAAAGCCAGCTGGAGGACACCATTGCTGCCTTGATGGTCAATTCTGATGGTGACGCTCAGCTTTGGCTCAAGGCTGCCTTGGCTGCCATCGACACCTGTGATGCTTCCATCCCCGGAGACGACGACATTCTCTCCGTTGAGAGCGCCGTCTTCCGCAAGCTCTGCAACATCGCCAACCTCGTCATCAAGCAACTCGCTAATCCAACCAAATCTTAA 582 0.5155 MDHSAKLLWVLGLCVAVMAQQAAAVELLKGNLIGGKETPTGKTLINKVCSASPTKDLCVQVLSSDALSTTANLKELAIISLRVAARNASGILADTKVLIDDDELDPDVQQGLADCKENILDAESQLEDTIAALMVNSDGDAQLWLKAALAAIDTCDASIPGDDDILSVESAVFRKLCNIANLVIKQLANPTKS 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02867 193 Pfam Plant invertase/pectin methylesterase inhibitor 44 180 IPR006501 GO:0004857
Vian2g02867 193 PANTHER PECTINESTERASE INHIBITOR-LIKE 17 180 - -
Vian2g02867 193 SMART PMEI_2 40 183 IPR006501 GO:0004857
Vian2g02867 193 Coils Coil 112 132 - -
Vian2g02867 193 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 187 IPR035513 -
Vian2g02867 193 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 188 IPR035513 -
Vian2g02867 193 NCBIfam pectinesterase inhibitor domain 38 187 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02867 Vian-Chr2 49521645 49522226 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02867 - - pvu:PHAVU_001G208600g 248.054