Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02861 ATGTCTACTCAGCCAAAACCAAAGCTTGGTAGGCTTCCCAGTATCAGAGATCGCGTTGAAGACACTCTCTCTGCTCATCGTAACGAACTCATTTCTCTTCTCTCCAGGTATGTGGCTCAGGGGAAAGGGATTTTGCAACCTCATAACTTAATTGATGAACTTGACAACATCCCTGGGGACGATCAAGCAAAGCTGGATCTTAAAAATGGTCCCTTCGGTGAAATTATCAGGGCAGCACAGGAAGCCATAGTTTTGCCTCCTTTTGTGGCAATAGGAGTTCGTCCAAGACCTGGTGTTTGGGAATATGTCCGTGTTAATGTCTCTGAACTGAGCGTGGAGCAATTAAGCGTTGCTGAATATCTGAGCTTTAAGGAAGAACTTGTGGATGGAAAGAATAATGACAATTTTGTACTGGAACTTGATTTTGAGCCATTTAATGCCTCATTCCCTCGTCCATCCCGTTCATCATCCATTGGCAATGGTGTCCAATTTCTCAATCGCCACCTTTCATCAATTATGTTCCGCAACAAAGACTCCTTGGACCCCTTGCTTGATTTCCTCCGAGCTCACAAGTATAAGGGCCATGCTCTGATGTTGAATGACAGAATACAGAACATTTCCAAACTCCAGACTGCTCTGGCCAAGACTGAGGATTATCTTAATAAGATTCCACGTGATACACCTTATTCAGAGTTTGAATACGTGTTACAAGGAATGGGTTTTGAGAGAGGATGGGGTGATACTGCTGAAAGGGTATTGGAAACGATGCATCTGCTACTGGATATTCTTCAGGCTCCTGATCCTTCTACCCTAGAGACTTTTCTTGGCAGAGTGCCAATGGTATTCAATGTTGTTATATTGTCTCCTCATGGCTTCTTCGGACAAGCCAATGTCTTGGGTTTGCCTGACACTGGTGGGCAGGTTGTTTATATACTAGATCAAGTGCGTGCCCTTGAGAATGAGATGCTCCTTCGGATTAAGAAACAAGGACTAGATTTCACTCCTAGAATTCTGATTGTTACCAGGCTAATACCCGATGCAAAGGGGACAACTTGCAATCAACGACTAGAAAGAGTCAGTGGTACCGAGCACACACATATTTTGCGAGTTCCATTCAGATCAGAGTCAGGAACTCTCCGTAAATGGATTTCAAGGTTTGATGTGTGGCCTTATCTAGAGACTTATTCAGAGGACGTTGCCAGTGAAATTGCTGCTGAGTTACAAGGTTATCCTGACTTCATCATTGGAAACTACAGTGATGGGAATCTTGTTGCATCTTTATTGGCTTATAAAATGGGAGTTACACAGTGCACCATCGCCCATGCACTTGAGAAGACAAAATATCCGGATTCAGATATATACTGGAAGAAATTTGATGACAAATATCACTTTTCATGCCAGTTCACTGCTGATTTAATAGCCATGAATAACGCTGATTTTATCATCACCAGCACCTACCAAGAGATTGCAGGAACGAAAAATACAGTTGGACAGTATGAGAGCCACACTGGTTTTACTCTTCCTGGGCTGTACAGGGTTGTCCACGGCATTGATGTTTTTGATCCCAAGTTCAATATTGTTTCTCCTGGAGCAGATATGTCAATATATTTTCCCTACTCTGAAAAGCAGAACAGGCTTACATCCCTGCACGGTTCCATTGAACAGCTACTGTATGATCCAACACAGACTGATGACTACATTGGAACACTGAAAGACAAGTCAAAGCCCATAATTTTCTCCATGGCAAGGCTAGACAGAGTGAAGAACATGACAGGATTGGTTGAATTATTTGGTAAGAGCAGCAAATTGAGGGAGCTGGTAAACCTTGTTGTAGTAGCTGGTTACATAGATGTAAAGAAGTCCAGCGACAGAGAAGAAATTGCAGAAATTGAGAAGATGCACAGTCTCATCAAAGAGTACAACTTAAATGGTGATTTTCGTTGGATTGCTGCCCAAACAAATAGGGCACGTAACGGGGAGCTGTATCGCTACATAGCAGACACACAAGGTGCTTTCGTTCAGCCTGCATTCTATGAAGCTTTCGGGCTCACAGTTGTGGAAGCCATGACCTGTGGACTCCCAACATTTGCTACTAGCAATGGTGGTCCAGCTGAGATCATCGAGCATGGTATATCAGGATTTCACATTGATCCTTATCACCCTGATCAAGCTTCAGAGCTATTGGTTGAATTCTTCCAAACCTGCAAGACTGACCCAAGCCATTGGAAGAAAATATCTGATGGTGGTCTTAAAAGAATTTATGAAAGCTACACTTGGAAGATTTATTCCGAAAGGCTCTTGACCTTGGCGGGAGTTTACAGTTTCTGGAAATACGTTTCCAAATTGGAGAGGCGTGAAACTCGACGATATCTTGAGATGTTCTATATCCTCAAGTTCCGTGATTTGGCAAAATCTGTGCCCCTAGCAAAAGATGATGCAAAGGAGTTTCATGGAAGACTTGTCTATGTTAAGTTAGATTATGTGAGAGATGGTGAGTACTGGTCGTTGAATTTGAATTCGCGCCTCCAGTACTTTCTAAAATATTTGGCACCCAACGCCGCGCTTCCGTCTTCTGGTCGTTTCTATCTTCACCTTCTTCTCGACTTCTCTGTCTTCAACTCCTTCGACACTTTCCAATCTCTAATTCTCTTGTTGTATGATAGAAAAATCGCACCTCTCCTCGGCAGCGAGTTCTCACAAGCGGTGGAGCAGAAGCAGGTGGCGCAGCAGGAGGCTGAGCAGTCCAAGTTCGTTGTCAATATAACTTTGAAGCGAATGTCTGGAATTGTGCGTCAACAAAGCAGTGTTGCTGAAAGTTTCAATCCTCCAAAGCTTAGGAGGAATGCTTCTGCTGCATCTAATATAAGTAGCACTGCTTCCCAGGTGGTCCAACACTTCCAGGTTGCAGCCACAGCCAGTACTGGGAAATTGGACTTGTTAAGGAACTTGGGAGCAGACTTAGCCATTGATTATACAAAGGGGCTGCTTGAAGAGCTGGAAGAAAAATTTGATGTAGTGTACGATACAAGTGAGATTGATAGAACATTGAAGGTTGTTAAAGAAAATGGGAAAGTTGTGACAGTAGCAGCACATGGAAGTTCTTCAGATATCTTCGTAATGCTCATACAGGGTATATTCCCTGCCCATCATTGA 3153 0.4329 MSTQPKPKLGRLPSIRDRVEDTLSAHRNELISLLSRYVAQGKGILQPHNLIDELDNIPGDDQAKLDLKNGPFGEIIRAAQEAIVLPPFVAIGVRPRPGVWEYVRVNVSELSVEQLSVAEYLSFKEELVDGKNNDNFVLELDFEPFNASFPRPSRSSSIGNGVQFLNRHLSSIMFRNKDSLDPLLDFLRAHKYKGHALMLNDRIQNISKLQTALAKTEDYLNKIPRDTPYSEFEYVLQGMGFERGWGDTAERVLETMHLLLDILQAPDPSTLETFLGRVPMVFNVVILSPHGFFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKKQGLDFTPRILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSESGTLRKWISRFDVWPYLETYSEDVASEIAAELQGYPDFIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTGFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYSEKQNRLTSLHGSIEQLLYDPTQTDDYIGTLKDKSKPIIFSMARLDRVKNMTGLVELFGKSSKLRELVNLVVVAGYIDVKKSSDREEIAEIEKMHSLIKEYNLNGDFRWIAAQTNRARNGELYRYIADTQGAFVQPAFYEAFGLTVVEAMTCGLPTFATSNGGPAEIIEHGISGFHIDPYHPDQASELLVEFFQTCKTDPSHWKKISDGGLKRIYESYTWKIYSERLLTLAGVYSFWKYVSKLERRETRRYLEMFYILKFRDLAKSVPLAKDDAKEFHGRLVYVKLDYVRDGEYWSLNLNSRLQYFLKYLAPNAALPSSGRFYLHLLLDFSVFNSFDTFQSLILLLYDRKIAPLLGSEFSQAVEQKQVAQQEAEQSKFVVNITLKRMSGIVRQQSSVAESFNPPKLRRNASAASNISSTASQVVQHFQVAATASTGKLDLLRNLGADLAIDYTKGLLEELEEKFDVVYDTSEIDRTLKVVKENGKVVTVAAHGSSSDIFVMLIQGIFPAHH 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02861 1050 FunFam Sucrose synthase 14 150 - -
Vian2g02861 1050 Gene3D - 951 1040 - -
Vian2g02861 1050 FunFam Sucrose synthase 285 569 - -
Vian2g02861 1050 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 300 768 - -
Vian2g02861 1050 Gene3D - 28 150 - -
Vian2g02861 1050 Gene3D - 151 280 - -
Vian2g02861 1050 NCBIfam sucrose synthase 27 808 IPR012820 GO:0005985|GO:0016157
Vian2g02861 1050 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 951 1033 IPR036291 -
Vian2g02861 1050 FunFam Sucrose synthase 151 280 - -
Vian2g02861 1050 Gene3D Glycogen Phosphorylase B; 285 802 - -
Vian2g02861 1050 Gene3D Glycogen Phosphorylase B; 532 759 - -
Vian2g02861 1050 PANTHER - 11 811 IPR012820 GO:0005985|GO:0016157
Vian2g02861 1050 Pfam Glycosyl transferases group 1 569 733 IPR001296 GO:0016757
Vian2g02861 1050 Pfam Sucrose synthase 11 558 IPR000368 GO:0005985|GO:0016157
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02861 Vian-Chr2 49462465 49470705 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02861 7 812 Glycosyltransferase AT4G02280 81.886 0.0 1425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02861 K00695 - gmx:100793371 1529.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02861 2 49462465 49470705 Vian2g02861 2 49462465 49470705 ECH