Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02851 ATGGAAGACGAGAATTTCAGTTTTGGCCGCTCTACTGCCTCCAAAAGCTACCAATCCAGGCTCAAGTCACACTTCGAGCTTTTCATCGATTTTGATGAGGTCAATGGGGATGAGGATTTTAGGACGGCTTATCCATGCCCTTTTTGCGCAGATGATTTTGATCTTCTTGAGCTATGTTGCCATCTTGACTTGGACCATCCGGCAGAAGCCAAGTCTGCGATTTGTCCTGTGTGTACCGTGTGGATTGGGTCAAATGTCGTTGATCATATAGCAGCACAACATGGAAACTTGTTTAAGAGTCAGCTGAAATCAAAATGGTACAAAGATGAATCCTACCCAGATCTTTCCTTTTCAAGAAAGGGTAAACCAGATTTTTCTTCTGGGTTATCTCCCGGGATGTCTACCTCCAACACATCAAGTGATCCATGGCTGTCATTTTTGTATGGTGCATCTGCTGTTGATGAATGTGAAAATGTGCTGCCAGATTCTTCAAGTGAAATAAGCGTTGAAGAAGTGCACTCAAATGATAAAGTGTTAGAAAGGGATGTTCAGCCATATTTATCTGACAAAGACCAAATAGAGAAAGCACAGCGCAGTAAATTTGTACAGGGACTTTTGGTGTCTACTATCCTTGATTCTGACTTCTGA 648 0.4228 MEDENFSFGRSTASKSYQSRLKSHFELFIDFDEVNGDEDFRTAYPCPFCADDFDLLELCCHLDLDHPAEAKSAICPVCTVWIGSNVVDHIAAQHGNLFKSQLKSKWYKDESYPDLSFSRKGKPDFSSGLSPGMSTSNTSSDPWLSFLYGASAVDECENVLPDSSSEISVEEVHSNDKVLERDVQPYLSDKDQIEKAQRSKFVQGLLVSTILDSDF 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02851 215 Pfam Drought induced 19 protein (Di19), zinc-binding 43 95 IPR008598 -
Vian2g02851 215 PANTHER PROTEIN DEHYDRATION-INDUCED 19 30 212 IPR033347 -
Vian2g02851 215 Pfam Stress-induced protein Di19, C-terminal 127 210 IPR027935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02851 Vian-Chr2 49370502 49373507 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02851 - - gmx:100527153 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02851 2 49370502 49373507 Vian3g01433 3 15705057 15707320 ECH
Vian2g02851 2 49370502 49373507 Vian2g02851 2 49370502 49373507 ECH
Vian3g01433 3 15705057 15707320 Vian2g02851 2 49370502 49373507 ECH