Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02842 ATGGAAAAACAAAGTCATGAATATACCATCATCGACATCCCCGACATAGAAATAGACCGTCTTCAGAGTAACCAACCAAAACCCCTCAAGGACGAGAAGATGAGCGGTGGCATGCGGTTTCTCAGGGTGGCGCTCCTCGTCATGCGAGGACGTTCCCAAAAGCCAAAGGCGATTCAACAGGTTGGTCAAATCGACGATGGGTCCAAGAGCAGGTGGAAGAAGGTTGTGGGGTCCACTAGGCCCTTGCACCTTCAAAGCAACCAATCCCCTGTTTCTGACTCCGGCAGTTTTTTTCATTTGCCTAAGTGGCCAGCGATGGAATGCAGAGGCAACGCTTCTAATTTTGTGGCGGAGGAGGGGCCTCACTCGGCTTCCCTACCCAGTAGCCGTTACGCTTCGGCTGTGGGGTTGAACGAACTGGTTCAATGTGATGAGGAGAATGTGAAGCAAGAGGTGATCGTGAAGGAGTGCGAGGAACGCATTCATGGAGATGGGGATGAGATGATTGATTCCAAGGCTGAGGATTTCATTACTCACTTCTACCAAGAAATGAGGCTGCAGCGTATGAATACCGTGGATCGTCTTTACGCCGAGCGAAGTCAAAGCCTAATAAGGTTGGCAAGACACCTCTATCGTGTCTCCAAGTTAGCAAGACATCCAAATAATTTGGTGATAGAAAGACAGGCTATTCGACTATCTTGTCGACATGGTGAAACAGTACACATGTCATGTCGACTTTACCAGACTGGGGACATGACACAATGTTTGTCATCGGATTATCTTGTCAACTTGGAACACAATACATATGTCTTAAACGAATTGGGAATATGA 831 0.4777 MEKQSHEYTIIDIPDIEIDRLQSNQPKPLKDEKMSGGMRFLRVALLVMRGRSQKPKAIQQVGQIDDGSKSRWKKVVGSTRPLHLQSNQSPVSDSGSFFHLPKWPAMECRGNASNFVAEEGPHSASLPSSRYASAVGLNELVQCDEENVKQEVIVKECEERIHGDGDEMIDSKAEDFITHFYQEMRLQRMNTVDRLYAERSQSLIRLARHLYRVSKLARHPNNLVIERQAIRLSCRHGETVHMSCRLYQTGDMTQCLSSDYLVNLEHNTYVLNELGI 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02842 276 Pfam Cotton fibre expressed protein 166 194 IPR008480 -
Vian2g02842 276 PANTHER COTTON FIBER PROTEIN 1 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02842 Vian-Chr2 49310473 49312457 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02842 - - vun:114191055 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02842 2 49310473 49312457 Vian3g02031 3 25645338 25646033 PCT