Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02820 ATGACGATCGGAGATGCTTTTCTACGCTTACTATTCATCGCAACTTGTTGGATTTCAGCTGCTTCTGCTGATTCCATCTATGGCTGCGGTGGTTTTGTCGAGGCGAGCTCATCGTTGGTAAAATCGAGAAAACAATCTGATACCAAGTTGGACTATTCCGATGTCACGGTTGAGCTTCAAACTGTGGATGGACTGGTAAAGGATAGAACACAATGCGCTCCAAATGGATACTATTTTATTCCAGTATATGACAAGGGTTCCTTTGTAATTAAAATTAATGGACCTCCAGGATGGACATGGGATCCGGAAAAGGTTCCTGTGGTGGTTGACAATAATGGTTGCAATGGAAATGAAGATATAAATTTTCGTTTCACTGGGTTCACTATATCTGGTAGAGTTGTGGGAGCTGTAGGGGGAGAAAGCTGTTCAATAAAAAATGGAGGCCCATCAAATGTAAAAGTTGACCTATTGTCCCTTTCTGGGGATCTGCTCTCGTCCGTCTTAACTTCATCATCAGGGAGTTACTTGTTTACAAACATCATTCCAGGAAAATATACACTACGTGCTTCAAATCCTGATATGGAAGTTGAAGTTAAAGGTTCCACACAGATTGAATTGGGCTTTGGAAATGGGGTAGTTGATGATATTTTCTTTGTCCCTGGATATAGTATCAGTGGATTTGTTGTTGCTCAGGGAAATCCGATTGTTGGAGTCCATATTTTCTTATATTCAGATGATGTTTCTGAGGTAGAATGTTTGCAAGGCACTGCTACTGGCCCACGACAAGAAAGAGCTCTCTGTCATGCTGCATCAGATGCTGATGGAAAGTTCACATTCAATTCAATACCTTGTGGGAGTTACGAACTTGTTCCATACTATAAAGGTGAAAATAAGGTATTTGATGTTTCGCCACCCAGCGTCTCAGTTAATGTCAAGCATCAGCATGTAACCGTGCCTCAAAAATTTCAGGTAACTGGATTTTCTGTTGGAGGCCGTGTGGTTGATGGAAATGGCATGGGAGTGGAGGGTGTTAAAATCATAGTTGATGGTCATGAAAGGTCTATTACTGATAATCAAGGATATTACAAACTTGATCAGGTTACATCCAAGCACTATACCATAGAAGCCAAAAAGGAGCATTACAAATTCAAGAATTTGGAGAATTATATGGTATTGCCAAATATGGCTTCAATAGAAGACATCAATGCCATTTCATACAATCTCTGTGGTTTGGTTAGGATGGCTAATGGTGGACTGAAAGCAAAGGTAGCTTTGACTCATGGACCTGATAATGTGAAACCACAAAAGAAGCAAACAGATGAAAATGGAAACTTCTGCTTTGAGGTTCTTCCCGGGGAATATCGTTTGTCAGCCATTGCTGCAACTCCTGAGAATGCTGGTGGACTCATGTTTACTCCATCTTACATCGATGTTGTGGTCAAAAGTCCCCTGTTGAATATTGAATTTTCACAAGCTCTGGTCAATATTCATGGTGCTGTATCCTGCAAGGAGAAATGTGGTCCATTTGTACATGTTACCCTGGTGAGACAAGTTGAGAAACATAATGGAGAGAGAAAAGCAATTAGCTTGACCACTGAGAGTAGTGAATTTCAGTTTTCAAATGTTATTCCTGGAAAATACAGGCTTGAGGTCAAACACAGTTCCCCTGAATCGGTCACATTGAAAGATAATTGGTGCTGGGAACAGAACTTCATAGATGTAAATGTTGGTGCTGAAGACGTAGAAGGAATCCTTTTTGTTCAAAAAGGCTACTGGGTCAATGTTATCTCGACTCACAATGTTGATGGTTACCTGACTCAACCAGATGGGTCAATTGTGAATTTGAAAATTCAGAAAGGTTCCCAGCATATATGTGTTGAACATCCTGGTGTACATGAATTTAGTTTTGTTAACTCGTGTATCTTCTTTGGGAGTTCATCGGTGAAAATTAATACAGCTACTCAATCAGTATGGAACATTCAAATATCCATGATTACGTTGTTCAGTTTTTTATGTATTATTATATTTTCTGGCTCACTTGATGCATTGCCTGAGAAAATAGTTGTTGATATTAAACATGAGGGAGCTGGTGTTATTGATTATACCACAGCCACACTGAAGTCCCATGGGAAAGATCAAACAGAAACTGCTATATTTGAGTATTCTGTTTGGGCCAATCTAGAAGAAAAGCTTACCTTTGTTCCTTGGGACTCTAGGAATGATGGGCAGAAGAAACTTTTATTTTATCCTAGAGAACATCAAGTATCAGTGACAGATGATAATTGTCAAGCTTATATTCCTACATTTTCTTGTGAAGTGGGTGCATACATTGAAGGATCAGTTTCACCTCCTCTTTCTGGCGTCCATATCAGAGTTTTTGCTGCTGGAGACAGCAGCATTACTGCACTTAAAAATGGCGAACTAGTTCTTGAAACAACCACTGGTACTGATGGTTCCTATGTGGCAGGACCTCTGCACAATGATATCGGTTACAATGTCGAGGCTTCAAAGCCTGGATATCATTTAAAACAAGTTGCGCCTCATTCCTTTACTTGTCAGAAGCTTAGTCAAATTTTAGTACACATACATCACAAAGATGATGCTGAAGAGCCCATTCCTTCTGTTTTGTTATCTTTGAGTGGTGACAATGGTTATAGAAACAACTCGGTATCAGGGACTGGAGGGACATTCCAGTTTGATAATTTGTTTCCTGGAATGTTCTATTTACGTCCTGTTTTAAAGGAGTATGCTTTCTCACCTCCAGCACAGGCAATAGAGCTTGGGGCAGGGGAGTCCAGAGAAGTTATTTTCCAGGCCACGCGTGTAGCCTACAGTGCTACTGGTGTTGTCACTTTGTTGTCCGGACAACCCAAAGGAGAAGTTTCAGTTGAAGCCCGGTCAGAGTCAAAAGGCTATTTTGAGGAAACAGTGACAGATTCCAATGGAAATTATCGTCTGAGAGGACTACAGCCTGATACTGTCTATGTTGTCAAAGTGGCTAAAAGGGATGCTGTAGGCAGTTCTAATATAGAACGTGCATCTCCAGATTCAATTGCTGTAAAGGTTGGAACCGAAGATATCAAGGGTTTGGATTTTATAGTTTTCGAGGAGCCGGAAATGACAATTATAAGTTGCCACGTTGAAGGAAACGGTACAGATGAACTACGTAAACATCTGATGGTAGAAATTAGGTCAGCCAGTGACCTTAACAAGATAGAATCAGTCTTCCCCCTTCCAATTTCAAACTTCTTCCAAGTGAAGGGCTTATCAAAGGGAAGACACCTTCTACAGCTTCAATCTGGTCTCCCACAAAGCTCGCTTAAGTTTGAATCTGATACCATTGAGGTCGACTTGGAAAAAAATGTTCAAATCCATGTGGGCCCTCTGGTATACAGGATCGAAGATCAACTGAAACAGGTTTTTTCTTGTCTCCTCTCTTTCTTTTGCCTGCCTTTGCTTTTCAAAGCTTGTCTTGGATTCCTAGTTATTTCACTATTGAAGGATTTGTATCAAGCCACGGTAGACATACCCACTCCAGGACTCAATGCGGCTTCAAGAAAAGACGTGAAGAAGCCAATATGCACTAAGTCTGGTTGA 3597 0.407 MTIGDAFLRLLFIATCWISAASADSIYGCGGFVEASSSLVKSRKQSDTKLDYSDVTVELQTVDGLVKDRTQCAPNGYYFIPVYDKGSFVIKINGPPGWTWDPEKVPVVVDNNGCNGNEDINFRFTGFTISGRVVGAVGGESCSIKNGGPSNVKVDLLSLSGDLLSSVLTSSSGSYLFTNIIPGKYTLRASNPDMEVEVKGSTQIELGFGNGVVDDIFFVPGYSISGFVVAQGNPIVGVHIFLYSDDVSEVECLQGTATGPRQERALCHAASDADGKFTFNSIPCGSYELVPYYKGENKVFDVSPPSVSVNVKHQHVTVPQKFQVTGFSVGGRVVDGNGMGVEGVKIIVDGHERSITDNQGYYKLDQVTSKHYTIEAKKEHYKFKNLENYMVLPNMASIEDINAISYNLCGLVRMANGGLKAKVALTHGPDNVKPQKKQTDENGNFCFEVLPGEYRLSAIAATPENAGGLMFTPSYIDVVVKSPLLNIEFSQALVNIHGAVSCKEKCGPFVHVTLVRQVEKHNGERKAISLTTESSEFQFSNVIPGKYRLEVKHSSPESVTLKDNWCWEQNFIDVNVGAEDVEGILFVQKGYWVNVISTHNVDGYLTQPDGSIVNLKIQKGSQHICVEHPGVHEFSFVNSCIFFGSSSVKINTATQSVWNIQISMITLFSFLCIIIFSGSLDALPEKIVVDIKHEGAGVIDYTTATLKSHGKDQTETAIFEYSVWANLEEKLTFVPWDSRNDGQKKLLFYPREHQVSVTDDNCQAYIPTFSCEVGAYIEGSVSPPLSGVHIRVFAAGDSSITALKNGELVLETTTGTDGSYVAGPLHNDIGYNVEASKPGYHLKQVAPHSFTCQKLSQILVHIHHKDDAEEPIPSVLLSLSGDNGYRNNSVSGTGGTFQFDNLFPGMFYLRPVLKEYAFSPPAQAIELGAGESREVIFQATRVAYSATGVVTLLSGQPKGEVSVEARSESKGYFEETVTDSNGNYRLRGLQPDTVYVVKVAKRDAVGSSNIERASPDSIAVKVGTEDIKGLDFIVFEEPEMTIISCHVEGNGTDELRKHLMVEIRSASDLNKIESVFPLPISNFFQVKGLSKGRHLLQLQSGLPQSSLKFESDTIEVDLEKNVQIHVGPLVYRIEDQLKQVFSCLLSFFCLPLLFKACLGFLVISLLKDLYQATVDIPTPGLNAASRKDVKKPICTKSG 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02820 1198 Gene3D - 329 406 - -
Vian2g02820 1198 FunFam Carbohydrate-binding-like fold 143 215 - -
Vian2g02820 1198 Gene3D Immunoglobulins 144 214 IPR013783 -
Vian2g02820 1198 SUPERFAMILY Starch-binding domain-like 219 309 IPR013784 GO:0030246
Vian2g02820 1198 SUPERFAMILY Cna protein B-type domain 146 196 - -
Vian2g02820 1198 FunFam Carbohydrate-binding-like fold 328 402 - -
Vian2g02820 1198 Pfam Carboxypeptidase regulatory-like domain 947 1000 - -
Vian2g02820 1198 SUPERFAMILY Carboxypeptidase regulatory domain-like 327 394 IPR008969 -
Vian2g02820 1198 SUPERFAMILY Cna protein B-type domain 865 924 - -
Vian2g02820 1198 SUPERFAMILY Starch-binding domain-like 944 1001 IPR013784 GO:0030246
Vian2g02820 1198 PANTHER CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING 19 1143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02820 Vian-Chr2 49097749 49116570 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02820 K26500 - gmx:100794049 2093.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02820 2 49097749 49116570 Vian2g02820 2 49097749 49116570 ECH