Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02818 ATGGCTCCTCCGAACGATCCAGTGAATGCCACGTTAGGACTGGAGCCATCGGAAAAGGTTTTCGACTTATCTGACGGGAAACTCACCGTGAAAGGTGTGGTATTACTCTCTCACGTACCCGAGAACGTCACTTTCAGTTCCTTCTCCTCAATCTGTGTACCTCGTGATGCCCCATCTTCCATCCTTCAACGTGTCACTGCCGCGTCGCACAAAGGTGGCTTCCTCGGATTCTCCCATGTTTCACCCTCCGACAGATTGATAAACTCCTTGGGAAGTTTCAGAGGTAGAAACTTCCTCAGCATCTTCAGGTTCAAAACATGGTGGTCGACCCAGTGGGTCGGAAATTCCGGTTCAGACTTACAAATGGAAACTCAGTGGATCCTCATAGAAGTCCCCGAAACAGAATCCTATGTCGTAATCATTCCCATAATAGAAAAAAGCTTCAGGTCGGCGCTTCACCCTGGCTCTGATGATCATGTTAAGATTTGCGCGGAGAGTGGTTCTACTCAAGTGAGAGCATCGAGTTTCGGTGCAATTGCATACGTCCACGTGGCTGAAAACCCTTACAACCTGATGAGAGAGGCCTACAGTGCTCTCAGGGTTCACCTTGACTCGTTTAGGTTGTTGGAGGAGAAAACGATAGAGTTGATGATTGTGAAGGTGAGAGAGGAAATTGATGATCTCTTTGGGGGAAAGGGAAAGGAGAGCAACGAAAGTGGAGGGTGTTGTTGCAAAGCAGCGGAGTGTGGTGGGATGAAGGACTTCACAACGGATTTGAGGACTGAATTCAAAGGTTTGGATGATGTTTATGTGTGGCATGCGCTCTGTGGCGGATGGGGTGGTGTGAGGCCAGGAACTACACATCTTGATTCGAAAATAATACCATGCAAACTCTCTCCTGGTCTTGTTGGGACCATGAAGGATCTTGCAGTGGATAAAATAGTGGAAGGTTCCATAGGGCTTGTTCATCCTCATCAAGCTAATGATCTCTACGATTCCATGCACTCTTATCTTGCCCAAACCGGTGTTACTGGAGTCAAAATTGACGTCATTCACAGTCTTGAATACGTATGCGAGGAATATGGAGGCAGAGTGGAGATTGCCAAGGCTTATTACGATGGGTTGACAAACTCCATAATCAAGAATTTCAATGGAAGTGGAATCATCGCTAGCATGCAACAGTGCAACGATTTCTTCTTCCTTGGAACCAAACAAATTCCCTTTGGAAGAGTTGGGGATGACTTTTGGTTCCAAGATCCGAATGGGGACCCAATGGGAGTGTTCTGGTTACAGGGGGTGCACATGATTCACTGTTCCTACAACAGCTTGTGGATGGGACAGATAATTCAACCCGATTGGGACATGTTTCAATCGGATCATGAGTGTGCAAAATTTCATGCTGGTTCAAGGGCTATTTGTGGTGGTCCTGTCTATGTGAGTGATAGTGTTGGCTCTCATGATTTTGATCTCATTAAGAAGCTTGTCTTCCCTGATGGTACCGTGCCCAAATGCATATATTTTCCCCTTCCAACAAGAGACTGCCTTTTCAGGAACCCTCTCTTTGACCAAAAAACCGTTCTCAAAATTTGGAACTTCAATAAGTATGGAGGAGTTATTGGTGCTTTCAACTGTCAAGGGGCTGGTTGGGACCCAAAGGGGAAGAAATTTAAGGGTTTCCCAGAGTGTTACAAAGCAATATCATGCACTGTTCATGTAACTGAGGTTGAATGGGATCAAAAGAAAGAAGCAGAACATATGGGTAAGGCAGAGGAGTATGTTGTGTACCTCAATCAGGCTGAGGTACTGCATTTGATGACCCCCGTGTCTGAACCACTGCAATTAACTATTCAACCATCCACTTTTGAACTTTATAACTTTGTCCCAGTTGAAAAGCTAGGTAGTAGCAACATAAAATTTGCACCCATTGGGCTAACAAACATGTTCAACAGTGGAGGCACAATTCAAGAATTGGAGTATATTGAGAAGGATGTTAAAGTTAAGGTTAAGGGTGGTGGGAGATTCCTTGCTTACTCGACTCAATCTCCAAAGAAGTTCCAACTGAATGGTTCTGATGCTGCTTTCCAGTGGCTGCCTGATGGCAAACTCACTCTCAACCTTGCTTGGATTGAAGAGAATGACGGGGTTTCTGATTTGGCAATTTTTTTCTAG 2169 0.4527 MAPPNDPVNATLGLEPSEKVFDLSDGKLTVKGVVLLSHVPENVTFSSFSSICVPRDAPSSILQRVTAASHKGGFLGFSHVSPSDRLINSLGSFRGRNFLSIFRFKTWWSTQWVGNSGSDLQMETQWILIEVPETESYVVIIPIIEKSFRSALHPGSDDHVKICAESGSTQVRASSFGAIAYVHVAENPYNLMREAYSALRVHLDSFRLLEEKTIELMIVKVREEIDDLFGGKGKESNESGGCCCKAAECGGMKDFTTDLRTEFKGLDDVYVWHALCGGWGGVRPGTTHLDSKIIPCKLSPGLVGTMKDLAVDKIVEGSIGLVHPHQANDLYDSMHSYLAQTGVTGVKIDVIHSLEYVCEEYGGRVEIAKAYYDGLTNSIIKNFNGSGIIASMQQCNDFFFLGTKQIPFGRVGDDFWFQDPNGDPMGVFWLQGVHMIHCSYNSLWMGQIIQPDWDMFQSDHECAKFHAGSRAICGGPVYVSDSVGSHDFDLIKKLVFPDGTVPKCIYFPLPTRDCLFRNPLFDQKTVLKIWNFNKYGGVIGAFNCQGAGWDPKGKKFKGFPECYKAISCTVHVTEVEWDQKKEAEHMGKAEEYVVYLNQAEVLHLMTPVSEPLQLTIQPSTFELYNFVPVEKLGSSNIKFAPIGLTNMFNSGGTIQELEYIEKDVKVKVKGGGRFLAYSTQSPKKFQLNGSDAAFQWLPDGKLTLNLAWIEENDGVSDLAIFF 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02818 722 SUPERFAMILY (Trans)glycosidases 251 494 IPR017853 -
Vian2g02818 722 PANTHER - 245 713 IPR008811 -
Vian2g02818 722 Pfam Raffinose synthase or seed imbibition protein Sip1 21 215 IPR008811 -
Vian2g02818 722 Pfam Raffinose synthase or seed imbibition protein Sip1 247 705 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02818 Vian-Chr2 49090753 49093607 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02818 221 722 Glycoside Hydrolase AT4G01970 59.528 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02818 K06611 - gmx:100815922 937.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02818 2 49090753 49093607 Vian2g02818 2 49090753 49093607 ECH