Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02812 ATGGCAAATAGACCGGATCCAGATATTGATGACGACTTTCGTGAGCTTTATAAGGAGTACACTGGCCCCCCAAGTTCTGCTGCTACGAACACGCAAGAGAGGGCAAAACCAAATAAGAGGTCTAATGCAGGGTCTGATGAGGAGGATGAAGGTCGGGACCCAAATGCTGTTCCCACTGATTTCACCAGCCGAGAAGCTAAGGTTTGGGAGGCTAAGTCAAAGGCTACTGAAAGGAATTGGAAGAAAAGGAAGGAGGAGGAAATGATATGCAAGCTTTGTGGAGAATCAGGGCATTTCACTCAGGGCTGCCCATCTACCCTTGGAGCCAATCGCAAGTCTCAAGATTTCTTTGAAAGGATACCTGCTAGAGACAAAAATGTACGGGCACTTTTCACAGAGAAAGTTTTAAGCAAGATTGAAAGGGACATTGGTTGCAAAATAAAGATGGATGAAAAGTTTATCATTGTCAGTGGTAAGGATAGATTAGTTATGGCAAAAGGTGTTGATGCGGTACACAAGATTCGAGAAGAGGGTGAACAAAGGGGATCATCTAGTTCTCAAATGACCCGATCAAGATCACCTGAGAGAAGTGAGAGAAGTCCGGTTAATGCACGGTTTCAACGCTCTGAGCCCCAAAGGTCTCATTCTGGACCACGGAATACATCTCAGTTTCAACAAAGGTTTGGTAGGCAGGAGAGGGCTGTTGAAGACCGAATCCGGGAGGATGTTCAAAAGTTTGCTAGAGGTTCTCCACAAGCAAGAGCTTATGGAAATAGTGGAGCTAGAGGTCGATCAAGCCAGTCAAGATCTCCAAGACATGCCCCTTTTACAGGAAACTCATATAGTTCTTTTGATGGTCGTAATCAAAACATGGGTGCGTTTAGGAATGATGGCTGGGATCATAGAAGAGAATCTGGTATCCAGCCTGGTCATCAGTTTGATTACAATGCCTCCCCACAGACTTTGGAAGAATTAGAGTTGGAATATAAGAACGAGGCAGCAGAGCTAATGAAAATTCGTGACAGAGAAGAAGATGAAGAAAATTTCAAGCATCGGGAGGCTATTAGAGATTTGAGGGAGCAGTACATGAGCAAAGTTGGCTTGGTAAGGGCTACACATGCAAGACAGTGGGAAGATTTCCTTCAGCATGATGCGCAGAGGCTTCAACAGCAGGCAGTTCAACAGATGTCTTCTGGTTATCGAGGTTTTAAACAGCAGAGCTTTCCTGAATATGATGGGTCCTCTGTCAATCCTCCTCCCTATGCTGGGACGAATTTACCATTGGATTCAAGGAACAGGTTCTCAGACAACATGGAACCTTATACTACTAGGCCTCATGATAATTTTGGGGAATTTCATAGGCGTGGAGATTTTGCAAAAGCTTACAACAGATATTAA 1398 0.4442 MANRPDPDIDDDFRELYKEYTGPPSSAATNTQERAKPNKRSNAGSDEEDEGRDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGANRKSQDFFERIPARDKNVRALFTEKVLSKIERDIGCKIKMDEKFIIVSGKDRLVMAKGVDAVHKIREEGEQRGSSSSQMTRSRSPERSERSPVNARFQRSEPQRSHSGPRNTSQFQQRFGRQERAVEDRIREDVQKFARGSPQARAYGNSGARGRSSQSRSPRHAPFTGNSYSSFDGRNQNMGAFRNDGWDHRRESGIQPGHQFDYNASPQTLEELELEYKNEAAELMKIRDREEDEENFKHREAIRDLREQYMSKVGLVRATHARQWEDFLQHDAQRLQQQAVQQMSSGYRGFKQQSFPEYDGSSVNPPPYAGTNLPLDSRNRFSDNMEPYTTRPHDNFGEFHRRGDFAKAYNRY 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02812 465 MobiDBLite consensus disorder prediction 23 38 - -
Vian2g02812 465 MobiDBLite consensus disorder prediction 204 229 - -
Vian2g02812 465 MobiDBLite consensus disorder prediction 174 289 - -
Vian2g02812 465 PANTHER OS01G0252900 PROTEIN 1 465 - -
Vian2g02812 465 MobiDBLite consensus disorder prediction 404 428 - -
Vian2g02812 465 MobiDBLite consensus disorder prediction 404 421 - -
Vian2g02812 465 ProSiteProfiles Zinc finger CCHC-type profile. 90 105 IPR001878 GO:0003676|GO:0008270
Vian2g02812 465 MobiDBLite consensus disorder prediction 230 247 - -
Vian2g02812 465 MobiDBLite consensus disorder prediction 259 289 - -
Vian2g02812 465 MobiDBLite consensus disorder prediction 65 80 - -
Vian2g02812 465 MobiDBLite consensus disorder prediction 39 55 - -
Vian2g02812 465 Coils Coil 322 346 - -
Vian2g02812 465 MobiDBLite consensus disorder prediction 1 80 - -
Vian2g02812 465 MobiDBLite consensus disorder prediction 1 18 - -
Vian2g02812 465 SUPERFAMILY Retrovirus zinc finger-like domains 77 109 IPR036875 GO:0003676|GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02812 - - gmx:100806099 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02812 2 49036361 49039164 Vian2g02812 2 49036361 49039164 ECH