Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02809 ATGGCCATGGCAGCTCCAACTCTGACCCCAATTCCTTCAAGAACAACCTTCAATCATCAAATCCATGGCCTTCAGCTAAAATTCTCAGTTTCCACTTTCAACCCTCCAATCCAAAACAGAGGAAGGAGCCTTCGAATCCGATTATCATCTTCCCCCAATCAGAACAATAATCAGTCCTCTCCCGGATTATACTCCGCAAAGAAATTCGAGCTTACCACATCCAACGTCGACCTTGTTCTCGAAGATGTTCGCCCTTACCTCATCGCAGACGGTGGCAACGTCGACGTGGTCTCCGTCGAAGACGGCGTCGTATCTCTCCGTCTTCAAGGAGCTTGCGAGAGCTGCCCCAGCTCCACCACAACCATGACGATGGGGATCGAGCGCGTTCTTAAGGAAAAATTCGGAGATGCCGTTAAGGACATTCGCCAAGTCTACGATAACCAACCCAAGGAGACAACCGTTGAGGCTGTGAATAGTCATCTTGATGTATTGAGACCGGCCATAAAGAATTACGGAGGCAGCGTGGAAGTGTTATCCGTTGAAGGTGAGGAGTGCAAGGTTAAGTATGTTGGACCAGACTCCATTGGATCCGGAATCAAAGCAGCCATCAAGGAGAGGTTTCCAGACATTCTCAATGTTACCTTCTCTTCCTAG 654 0.4893 MAMAAPTLTPIPSRTTFNHQIHGLQLKFSVSTFNPPIQNRGRSLRIRLSSSPNQNNNQSSPGLYSAKKFELTTSNVDLVLEDVRPYLIADGGNVDVVSVEDGVVSLRLQGACESCPSSTTTMTMGIERVLKEKFGDAVKDIRQVYDNQPKETTVEAVNSHLDVLRPAIKNYGGSVEVLSVEGEECKVKYVGPDSIGSGIKAAIKERFPDILNVTFSS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02809 217 Pfam NifU-like domain 77 136 IPR001075 GO:0005506|GO:0016226|GO:0051536
Vian2g02809 217 Gene3D - 68 152 IPR034904 -
Vian2g02809 217 Gene3D - 153 215 IPR034904 -
Vian2g02809 217 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 151 214 IPR034904 -
Vian2g02809 217 FunFam NifU-like protein 1 chloroplastic 152 215 - -
Vian2g02809 217 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 65 214 - -
Vian2g02809 217 FunFam NifU-like protein 3, chloroplastic 68 151 - -
Vian2g02809 217 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 74 145 IPR034904 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02809 Vian-Chr2 49018722 49019700 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02809 K22074 - gmx:100527356 286.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02809 2 49018722 49019700 Vian2g02809 2 49018722 49019700 ECH