Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02759 ATGAATTGGGAAGGAGGTCTCAAAAGCATGGTGTTGATGGTTGCTTTTATGGTGGCCATGGTGGCTGTTCAAAATGTGGGGTGCGAGGAAGGTGTTGATCATGTTCGTGACTCAGCACGCAATTTAGTTCAGAACGGTGGCTTCGTTCGACGAAGCGGCACCAACTTTGTTCTGAACAACAAGCGTTTCTACTTCAACGGATTCAACGCTTACTGGTTAATGTTAATGGCATCTGACCCATCAACGAGGCCCAAGGTCACTTCCGTTTTGCAACAAGCTTCCAGCCATGGCTTAACCGTTGCCAGAACTTGGGCTTTCAACGATGGAGCTTACAGAGCCCTTCAGGTTTCTCCTGGTTCATACGACGAGAAAGTATTCAGGGGATTGGACTTTGTGATATCAGAAGCGGGAAAAAATGGTGTACGATTGATACTGAGCTTGGTGAACAACTGGAAAGATTTTGGTGGGAAAAATCAGTATGTGGAATGGGTGAAGCAGCATGGTGAGTACGTGAACACTGAAGATGATTTCTTTACGCATCCTTTGGCCAAACAACACTTCAAAAACCATATCAAGGCTGTGCTGACGAGAAAAAACACAGTAAGTGGGGTGGCATATAAGGACGATCCTGCCATATTTGCATGGGAACTTATGAACGAACCCCGTTCCCAACACGACAACTCCGGAAAAGTTATTCAGGAATGGGTGATTGAGATGGCTGGATACGTCAAATCCATCGATAGTAATCATTTACTTGAAATAGGACTCGAAGGGTTCTATGGTGAAGATAGAAAACAAATCAATCCCGGGCTGCCAGGCTCAAATGAAGCTGCTCAGGTTGCATTTGTTGACAAGTGGCTACAAACACACATTGAGGATTCGAAAAATGTTCTTGGGAAACCTATTGTCGTTGGTGAATTTGGGAAGTCCTGTAGGTCATACAGTGTGGCTGAAAGGGACAGTTACTTGAGCAAAATGTATAATGCAATATACAGTAATGCTATCAGTGGGGGACCCTGTGCTGGAGGGCTTTTTTGGCAGCTCATGGCTCAAGGAATGGACAGTTTCTATGATGGTTACGAAGTTGTCTTCCAGAACAGTCCTTCAACTACCAGAATTATTGATCAACAATCCCACAAAATGTCAAGTATTGCTTAG 1158 0.4447 MNWEGGLKSMVLMVAFMVAMVAVQNVGCEEGVDHVRDSARNLVQNGGFVRRSGTNFVLNNKRFYFNGFNAYWLMLMASDPSTRPKVTSVLQQASSHGLTVARTWAFNDGAYRALQVSPGSYDEKVFRGLDFVISEAGKNGVRLILSLVNNWKDFGGKNQYVEWVKQHGEYVNTEDDFFTHPLAKQHFKNHIKAVLTRKNTVSGVAYKDDPAIFAWELMNEPRSQHDNSGKVIQEWVIEMAGYVKSIDSNHLLEIGLEGFYGEDRKQINPGLPGSNEAAQVAFVDKWLQTHIEDSKNVLGKPIVVGEFGKSCRSYSVAERDSYLSKMYNAIYSNAISGGPCAGGLFWQLMAQGMDSFYDGYEVVFQNSPSTTRIIDQQSHKMSSIA 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02759 385 PANTHER - 11 384 IPR045053 GO:0004553
Vian2g02759 385 Pfam Cellulase (glycosyl hydrolase family 5) 66 265 IPR001547 GO:0004553|GO:0071704
Vian2g02759 385 SUPERFAMILY (Trans)glycosidases 48 375 IPR017853 -
Vian2g02759 385 Gene3D Glycosidases 44 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02759 Vian-Chr2 48534925 48537047 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02759 10 384 Glycoside Hydrolase AT5G66460 49.020 3.14e-134 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02759 K19355 - gmx:100787923 650.973