Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02758 ATGATGGTGGCAAGTGAGCTACAAGGACTTTCCATGTCCCTGGCTTCAAAGAAGCCAACCTTCCACCGTGACAAGGATTTGTCTTCCTCATTCTCTGGTAGGAGAGTGAACTTGCTTCAATCAAAGAATGTAGTATCTGGTTTTCGTCCGGGAAAATTCTTTAGTGTCACACACAGAAACACAACCAGAAGATTTATGACTATGTCTACTCTTGCAGATGTTGCAAATGACTTTATGTCCCTTCAATCACCGATACTTACAGGAAGAGAAGCCAACCCAAAGACTGTTGCATCGATCATATTAGGCGGAGGAGCTGGAACTCGTCTGTTCCCCCTTACTCAAAGAAGAGCTAAACCTGCTGTACCATTTGGAGGATGCTATAGACTAGTTGACATACCGATGAGTAATTGCATTAACAGTGGAATTAACAAAATTTACGTCCTCACTCAATATAACTCTCAGTCCCTCAACCGACACATTGCTCGAACATATAATTTAGGAGGTTGCATCAACTTTGGAGGTGGTTTTGTTGAGGTATTGGCTGCAACTCAAACACCTGGTGAATCAGGAAAAAAGTGGTTTCAGGGTACAGCCGATGCTGTAAGACAATTCCTTTGGTTGTTTGAGGACGCTGATCACAAAAATATAGAGAACGTTCTGATATTGTGTGGTGATCAGCTCTATCGAATGGATTACATGGACATTGTGCAGAAGCACGTTAATTCATGTGCTGATATATCAGTATCTTGTCTCCCAGTGGATGGCAGTCGGGCCTCTGATTTTGGATTGGTGAAGGTTGATGAAAGAGGACGGATATGCCAGTTCTTAGAAAAACCTAAGGGCGAATTGTTAAGATCTATGGCTGCTTCCCACTCTAAAGGAAGTGATATCTCCTCGGGGTCCGGATTTGAGAAGTTGACGGGGGGCTGTTATCCTAATGCAAATGATTTTGGATCTGAGGTCATTCCCTTGGCTGCAAGAGATTTTAATGTCCAGGCATGTCTTTTCAATGGTTATTGGGAAGATATTGGGACTATAAAATCTTTCTTTGATGCGAACTTGGCTCTTATGGACCAGCCGCCCAAGTTTCAGTTGTATGACCAGTCCAAGCCTATTTTTACTTGTCCTCGCTTCCTACCACCAACTAAAATGGAGAAGTGTCAGGTAATTAACTCTTTGATTTCAGATGGTTGCTTTTTGAAAGAGTGCACAGTACAACATTCCATTGTGGGAATTCGATCACGACTTGATTCTGGAGTGCAGATAAAGGATACCATGATCATGGGTGCTGACTATTACCAAACAGAAGCTGAAATTGCTTCCCTTGTAGCAGCGGGAAATGTTCCAATAGGCATTGGGAAAAATACAAAAATTGTGTAA 1380 0.4239 MMVASELQGLSMSLASKKPTFHRDKDLSSSFSGRRVNLLQSKNVVSGFRPGKFFSVTHRNTTRRFMTMSTLADVANDFMSLQSPILTGREANPKTVASIILGGGAGTRLFPLTQRRAKPAVPFGGCYRLVDIPMSNCINSGINKIYVLTQYNSQSLNRHIARTYNLGGCINFGGGFVEVLAATQTPGESGKKWFQGTADAVRQFLWLFEDADHKNIENVLILCGDQLYRMDYMDIVQKHVNSCADISVSCLPVDGSRASDFGLVKVDERGRICQFLEKPKGELLRSMAASHSKGSDISSGSGFEKLTGGCYPNANDFGSEVIPLAARDFNVQACLFNGYWEDIGTIKSFFDANLALMDQPPKFQLYDQSKPIFTCPRFLPPTKMEKCQVINSLISDGCFLKECTVQHSIVGIRSRLDSGVQIKDTMIMGADYYQTEAEIASLVAAGNVPIGIGKNTKIV 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02758 459 SUPERFAMILY Nucleotide-diphospho-sugar transferases 96 403 IPR029044 -
Vian2g02758 459 CDD ADP_Glucose_PP 99 343 - -
Vian2g02758 459 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 83 377 IPR029044 -
Vian2g02758 459 Pfam Nucleotidyl transferase 98 357 IPR005835 GO:0009058
Vian2g02758 459 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 102 121 IPR005836 GO:0005978|GO:0008878
Vian2g02758 459 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 75 458 IPR011831 GO:0005978|GO:0008878
Vian2g02758 459 SUPERFAMILY Trimeric LpxA-like enzymes 376 458 IPR011004 -
Vian2g02758 459 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 193 201 IPR005836 GO:0005978|GO:0008878
Vian2g02758 459 Gene3D Hexapeptide repeat proteins 378 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02758 Vian-Chr2 48526310 48530879 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02758 K00975 - gmx:100805739 817.764