Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02739 ATGAATGGACATCCATTACATTATTATTTATTCCTTACGACCTTCCACCTTGTGTGTGTGTTTAGAGTTCTTTCATCTGTGGGGGCGCTCATAGCAGCAACATTATCTTCTGCAGTAGCCTTAAGATTTACCTTGAGCATGGGGCAAAAGCATTTAGTGGTGGCCTTCTGTTTATGGGCTTTAACATGTTCCTCTCTTCCATCTTTCTCCTACGGAATTCTGAAAATTGGTTTGAGGAAGAGACCTCTAGATCTTAATAGTATTCATGCTGCTAGAAAGGCAAGAGAAGGTTTAAGATATGGAAGGCCAATTATGGGTGAACATGATCAGTTTATCGGTAAGGCAAAGGGTGAAGATAGTGTTCCTTTGAAAAATTATTTGGATGCTCAGTATTTTGGTGAGATTGGAATTGGCACACCCCCTCAGACCTTCACTGTTGTGTTTGATACTGGTAGTTCCAACCTTTGGGTTCCATCATCAAAATGCTACTTTTCTCTTGCTTGTTATACCCATAATTGGTATAAGCCAAAGAAATCCAGAACATATGTCAAAAATGGAACATCATGTAAAATAAACTATGGATCTGGGTCAATATCTGGTTACTTCAGTCAAGATAGTGTTAAAGTTGGCAACGCTGTTGTCAAGCAGCTGGATTTCATTGAAGCTACCCGAGAAGGAAGTCTTTCCTTTCTGTCAGCAAAGTTCGATGGAATACTGGGACTTGGATTTCAGGAGATCTCAGTTGCAAATTCTGTTCCATTATGGTACAAAATGGTGGACCAAAATCTTATCAGTGAGAAGGTGTTTTCCTTTTGGTTGAATGGGGATCCAAATGCGAAAAAAGGCGGTGAAATAGTTTTCGGTGGTGTTAACCCAAAGCACTTTAAAGGAGACCACACTTATGTTCCAGTTACTGAAAAAGGTTACTGGCAGATTGAAATTGGAGATTTTTTCATTGGAGGTGCTTCTACAGGTGTTTGTGAGGGTGGCTGTGCTGCTATTGTGGATTCAGGAACATCTTTGCTGGCTGGTCCAACTCCTGTTGTAGCTGAAATCAACCATGCTATTGGAGCTGAAGGAGTTCTCAGTGTAGAATGTAAGGAAGTCGTTTCTCAATATGGAGAGATGATATGGGATCTCTTGGTATCAGGGGTGAAACCTGATGACATATGTTCCCAAGTTGGTTTATGTTCCGCCAAAAGGATTCAATCTAAGAGCCCTGGGATTGAAATGGTAACTGAAAAGGAACAGAGTGAGTTGACAGCAAGAGATACTCCCTTATGTTCATCTTGTCAGATGCTTGTTCTTTGGATCCAGAATCAACTAAAACAAAAACAAACAAAGGACAGAGTATTCAACTATGTGAATCAACTGTGTGAGAGCTTGCCAAGTCCCTCTGGAGAGTCAGTGATAAGCTGTAACAGTCTTTCCAAGATGCCAAACATTACATTCACAATTGGAGATAAACCTTTTGTCCTTACACCAGAGCAGTATATTTTGAGAACTGGAGAAGGCATTACAGAAGTATGCCTTAGTGGGTTTATGGCTTTTGATGTTCCTCCTCCACGGGGTCCATTGTGGATTCTTGGGGATGTTTTCATGAGGGCATATCACACCATCTTTGACTATGGAAATCTCCGAGTTGGGTTTGCTGAAGCTGTGTGA 1665 0.4102 MNGHPLHYYLFLTTFHLVCVFRVLSSVGALIAATLSSAVALRFTLSMGQKHLVVAFCLWALTCSSLPSFSYGILKIGLRKRPLDLNSIHAARKAREGLRYGRPIMGEHDQFIGKAKGEDSVPLKNYLDAQYFGEIGIGTPPQTFTVVFDTGSSNLWVPSSKCYFSLACYTHNWYKPKKSRTYVKNGTSCKINYGSGSISGYFSQDSVKVGNAVVKQLDFIEATREGSLSFLSAKFDGILGLGFQEISVANSVPLWYKMVDQNLISEKVFSFWLNGDPNAKKGGEIVFGGVNPKHFKGDHTYVPVTEKGYWQIEIGDFFIGGASTGVCEGGCAAIVDSGTSLLAGPTPVVAEINHAIGAEGVLSVECKEVVSQYGEMIWDLLVSGVKPDDICSQVGLCSAKRIQSKSPGIEMVTEKEQSELTARDTPLCSSCQMLVLWIQNQLKQKQTKDRVFNYVNQLCESLPSPSGESVISCNSLSKMPNITFTIGDKPFVLTPEQYILRTGEGITEVCLSGFMAFDVPPPRGPLWILGDVFMRAYHTIFDYGNLRVGFAEAV 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02739 554 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 333 344 IPR001969 GO:0004190|GO:0006508
Vian2g02739 554 Pfam Eukaryotic aspartyl protease 130 553 IPR033121 -
Vian2g02739 554 Gene3D Acid Proteases 74 289 IPR021109 -
Vian2g02739 554 ProSiteProfiles Saposin B type domain profile. 424 465 IPR008139 -
Vian2g02739 554 Gene3D - 361 463 - -
Vian2g02739 554 ProSiteProfiles Saposin B type domain profile. 361 401 IPR008139 -
Vian2g02739 554 FunFam Lysosomal aspartic protease 117 359 - -
Vian2g02739 554 SUPERFAMILY Acid proteases 63 553 IPR021109 -
Vian2g02739 554 Pfam Saposin-like type B, region 1 426 463 IPR007856 GO:0006629
Vian2g02739 554 Gene3D Acid Proteases 291 553 IPR021109 -
Vian2g02739 554 PRINTS Pepsin (A1) aspartic protease family signature 283 296 IPR001461 GO:0004190|GO:0006508
Vian2g02739 554 PRINTS Pepsin (A1) aspartic protease family signature 333 344 IPR001461 GO:0004190|GO:0006508
Vian2g02739 554 PRINTS Pepsin (A1) aspartic protease family signature 527 542 IPR001461 GO:0004190|GO:0006508
Vian2g02739 554 PRINTS Pepsin (A1) aspartic protease family signature 137 157 IPR001461 GO:0004190|GO:0006508
Vian2g02739 554 ProSiteProfiles Peptidase family A1 domain profile. 131 551 IPR033121 -
Vian2g02739 554 Pfam Saposin-like type B, region 2 365 397 IPR008138 -
Vian2g02739 554 CDD phytepsin 121 552 IPR033869 GO:0004190
Vian2g02739 554 SMART sapb_4 325 397 IPR008139 -
Vian2g02739 554 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 146 157 IPR001969 GO:0004190|GO:0006508
Vian2g02739 554 FunFam Lysosomal aspartic protease 409 553 - -
Vian2g02739 554 FunFam Aspartic proteinase A1 361 463 - -
Vian2g02739 554 SUPERFAMILY Saposin 362 463 IPR011001 -
Vian2g02739 554 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 64 552 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02739 Vian-Chr2 48328880 48333052 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02739 K08245 - gmx:548009 952.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02739 2 48328880 48333052 Vian2g02739 2 48328880 48333052 ECH
Vian2g02739 2 48328880 48333052 Vian3g01494 3 16317340 16320711 PCT