Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02731 ATGGGGTTTCAAAACTTGGTCTTGATGAGTTTTATGATGATCTTGTGCATCAGTCTATACGTGAATTGCATTGATATTGCTGAAGAAAGAATAGTTGCCCAAAGACCTAACGATTTCATCAAACGAAATGGCACCCGTTTTTTCCTAAATGGGAAGCCACACTACTTCAACGGATTCAATGCATATTGGCTAATGATTTTTGCAGCCGACCCATCTACAAGTTCTAAGGTCACTACAGTTTTTCAAGAAGCTTCCAAACATGGTTTAAACTTAGCAAGAACATGGGCATTCAATGATGGAGGTTACAAAGCCCTTCAAACTTCACCTGGTATTTACGACGAGAATGTTTTCAGGGCATTGGATGCTGTGATATCAGAAGCAGGAAAATATGGCATACGATTGATTCTAAGCCTGGTAGATAATTGGAAAGCTGGTGGTGGAAAGAATCAGTATGTTCAATGGGCAAAACAACGTGGTCAGAGCGTAAGAACTGAGGATGACTTCTTCTCTAATCCCCTCACTAAGCAATTCTACAAAAATCATGTCAAGACAGTGTTGACAAGAAAAAATACAGTGACTGGATTATTATACAAGGATGACCCCACCATTTTTTCGTGGGAGCTCATGAATGAACCTCGTTCTTCAGACTTTTCCGGGAAACAAGTTCAGGATTGGGTGAGTGAGATGGCTGCTTATGTGAAGTCCATTGACAACAAACACTTACTGCAAGTAGGGCTTGAAGGGTTTTATGGTAATTCAATGCCAGAAAGAGGACTGATCAATCCTGATGGACTCCATGCAGGAACTGATTTCATTTCTAACAACCTAGTTCCTGAAATCGATTATGCTTCCATTCATGCCTACCCTGATGAATGGATGGCGCGGTTTAACCAATCACATCAAGATGTCTTCACTGAAAGATGGGTTAGCACGCATATTCAAGATGCACAAAATGTTCTACGAAAGCCCATTCTTATTACGGAGTTTGGGTTAAGTGCAACATTTCGAGGATTCACCAATGCTAGAAGGGATCGATTGTATGCAAAATTTTACAAATGGGTATACGGCAGCGCTAGCCAGAGGGGACCATGTGCTGGTGCAGCTTTTTGGCAATTATTTGTTGAAGGAATGGATAACATGGCCGATGGTTATGTTATCATCTTTCAACGGAATCCTTCTACTACCAAAATCATCGTCCAACAATCTCTAAGAATGTCTCGTATTCGATAA 1230 0.4081 MGFQNLVLMSFMMILCISLYVNCIDIAEERIVAQRPNDFIKRNGTRFFLNGKPHYFNGFNAYWLMIFAADPSTSSKVTTVFQEASKHGLNLARTWAFNDGGYKALQTSPGIYDENVFRALDAVISEAGKYGIRLILSLVDNWKAGGGKNQYVQWAKQRGQSVRTEDDFFSNPLTKQFYKNHVKTVLTRKNTVTGLLYKDDPTIFSWELMNEPRSSDFSGKQVQDWVSEMAAYVKSIDNKHLLQVGLEGFYGNSMPERGLINPDGLHAGTDFISNNLVPEIDYASIHAYPDEWMARFNQSHQDVFTERWVSTHIQDAQNVLRKPILITEFGLSATFRGFTNARRDRLYAKFYKWVYGSASQRGPCAGAAFWQLFVEGMDNMADGYVIIFQRNPSTTKIIVQQSLRMSRIR 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02731 409 FunFam Mannan endo-1,4-beta-mannosidase 6 36 409 - -
Vian2g02731 409 SUPERFAMILY (Trans)glycosidases 38 382 IPR017853 -
Vian2g02731 409 PANTHER - 9 408 IPR045053 GO:0004553
Vian2g02731 409 Gene3D Glycosidases 36 409 - -
Vian2g02731 409 Pfam Cellulase (glycosyl hydrolase family 5) 52 334 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02731 Vian-Chr2 48243116 48244733 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02731 6 409 Glycoside Hydrolase AT5G66460 50.864 3.66e-151 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02731 K19355 - gmx:100788081 569.696