Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02729 ATGGGTTCTGAAGGTCCAACAACACCCATAACAACAATTCATGTGACAGGATTTAAGAAATTCCATGGAGTTGCTGAGAATCCGACCGAAACAATTGTCAATAATTTGGCAGAGTACATGAATAAGAAGGGTTTGCCAAAGGGTTTAGTTATTGGGAGCTGCAGCATTCTTGAAACTGCTGGTCAAGGAGCACTTGTTTCACTGTACCAGAGATTGCAATCCGCTGTTATTTCCAAGGACTCTGAATCTTCAAATTCTAATAGAACTATTTGGCTGCATTTTGGGGTTAACAGTGGTGCAACAAGGTTTGCTATAGAGAACCAGGCAGTCAATGAGGCTAATTTTCGATGTCCGGATGAAATGGGTTGGAAGCCCCAGAAAGTCCCCATTGTTCCTTCGGATGGTGGAATTTCACGAACAAGGGAGACTTCACTCCCTGTAGAGGAGATCACCAAAGCCTTGACAGAAAAGGGATACGAAGTTATGGTATCAGATGATGCAGGCAGGTTCGTGTGCAATTACGTTTACTATCACTCCCTTCGCTTTGCCGAGCGGAATGGAATCAAATCCCTTTTCGTGCACGTGCCACTCTTCTTCACAATAAATGAAGAGACTCAAATGAAATTCGCTGCTTCCTTGTTAGAAGTTCTTGCCTCTAAATCTTAG 666 0.4324 MGSEGPTTPITTIHVTGFKKFHGVAENPTETIVNNLAEYMNKKGLPKGLVIGSCSILETAGQGALVSLYQRLQSAVISKDSESSNSNRTIWLHFGVNSGATRFAIENQAVNEANFRCPDEMGWKPQKVPIVPSDGGISRTRETSLPVEEITKALTEKGYEVMVSDDAGRFVCNYVYYHSLRFAERNGIKSLFVHVPLFFTINEETQMKFAASLLEVLASKS 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02729 221 PIRSF Pyrrolidone-crbxlat_pptds 10 221 IPR000816 GO:0005829|GO:0006508|GO:0016920
Vian2g02729 221 FunFam Pyrrolidone-carboxylate peptidase isoform A 10 220 - -
Vian2g02729 221 CDD Peptidase_C15 12 219 IPR000816 GO:0005829|GO:0006508|GO:0016920
Vian2g02729 221 Gene3D - 10 219 IPR036440 -
Vian2g02729 221 Pfam Pyroglutamyl peptidase 13 198 IPR016125 -
Vian2g02729 221 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 12 218 IPR036440 -
Vian2g02729 221 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 10 219 IPR016125 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02729 Vian-Chr2 48226438 48228471 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02729 K01304 - gmx:100789152 412.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02729 2 48226438 48228471 Vian2g02729 2 48226438 48228471 ECH
Vian2g02729 2 48226438 48228471 Vian3g01474 3 16102413 16104704 PCT