Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02726 ATGGGTTGTGGCGGTGCATTCTCGCATCTCATTCTCACTGCAATCGCAATAGCAATAGCGATTCCATTGGCTGCCTGCGATACGCCTCCTGTGGTGTTCGTCTTCGGTGATTCCAACTCAGACACGGGTGGACTCGCTTCCGGACTCGGTTTCATTATCAATCTTCCCAATGGCCGCACTTTCTTCCGAAGATCCACAGGTCGTTTGTCGGATGGACGCCTGGTCATCGACCTTCTCTGCCAAAGTTTGAATGCAAGTTTGTTGGTACCATACTTGGACGCCTTGTCCGGAACCTCATTCACAAATGGAGCAAACTTTGCTGTGGTGGGGTCCTCTACTCTCCCTAAGTATGTTCCTTTCTCCTTAAATATACAGCTCATGCAATTCCGGCGTTTCAAAGCTCGTTCTCTTGAACTTGTTACGGCAGTAGGTTATAGCAATGATCTTGGCTGGGAGAATTTACATAACGAAGGGGCCAGGAAGTTTTGGGTTCACAATACTGGGCCATTGGGCTGTCTTCCTAAAATACTTGCACTGGCTCAGAAGAAGGATCTAGATTCATTGGGATGTCTTTCTAGTTATAACTCGGCAGCACGATTGTTTAATGAAGCGCTGCTTCATTTGAGTCAGAAACTAAGATCTGAACTGAAGGATTCTACTTTAGTCTATGTTGATATTTATGGCATTAAGCATGACCTCATTACAAATGCCGCAAAATATGGTTTCTCAAATCCGTTGATGGTATGTTGCGGCTTTGGAGGACCTCCTTACAACTTTGACGTAAGGGTAACATGTGGTCAACCTGGTTATCAGGTTTGTGACGAAGGGGCTCGATATGTAAGCTGGGATGGAATTCATCATACTGAAGCTGCAAATACGTGGATAGCTTCTAAGATACTTTCCATGGCTTATTCCACACCACGAACACCTTTTGATTTCTTTCGCCACTGA 951 0.4543 MGCGGAFSHLILTAIAIAIAIPLAACDTPPVVFVFGDSNSDTGGLASGLGFIINLPNGRTFFRRSTGRLSDGRLVIDLLCQSLNASLLVPYLDALSGTSFTNGANFAVVGSSTLPKYVPFSLNIQLMQFRRFKARSLELVTAVGYSNDLGWENLHNEGARKFWVHNTGPLGCLPKILALAQKKDLDSLGCLSSYNSAARLFNEALLHLSQKLRSELKDSTLVYVDIYGIKHDLITNAAKYGFSNPLMVCCGFGGPPYNFDVRVTCGQPGYQVCDEGARYVSWDGIHHTEAANTWIASKILSMAYSTPRTPFDFFRH 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02726 316 Gene3D SGNH hydrolase 138 305 IPR036514 -
Vian2g02726 316 CDD SGNH_plant_lipase_like 30 301 IPR035669 -
Vian2g02726 316 Pfam GDSL-like Lipase/Acylhydrolase 32 148 IPR001087 GO:0016788
Vian2g02726 316 Pfam GDSL-like Lipase/Acylhydrolase 152 299 IPR001087 GO:0016788
Vian2g02726 316 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 152 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02726 Vian-Chr2 48190323 48194369 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02726 30 306 Acyl Lipid Metabolism Gene Families AT4G10950 23.881 2.68e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02726 - - gmx:100797617 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02726 2 48190323 48194369 Vian2g02726 2 48190323 48194369 ECH