Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02722 ATGGCAAGACTGGCGGCACTCCAACAGCACCTACTATCTTGCTCTCCCTTGACCACCTCTCTTTCTGACTTAAGTGGAACCAGACTTCATACTCAACATCAGTTGAAGAGAAAATTATGGCAGCCAAAAGGGACTCTCTATGTCTCCGCATCAAGCACCAAGAAAATCTTCAATATGGCAGGCACCAGATTTATTGGAGTGTTTTTGTCTAGGCTCCTTGTCAAAGAGGGTCACCGAGTGACTTTATTTTCAAGAGGTAAAGCGCCTGTCACTCAACAATTGCCAAGTGAATCAGATGGTGATTATGCTGTTTTTTCTTCCAAGATCTTGCATTCGAAAGGTGACAGAAAGGACTTTGAATTTGTAAAATCCAGTCTCTCAGGAGAGGAGTTTGATGTTATTTGCATAAATGGACGTGAGGCAGACGAAGTTGAGCCTGTATTGGATGCTCTGCCGAATCTGGAACAAGTTTCTAGAAGGAAAGCAGCGTCTTTGATCTTATCAACCTACATTCTCTCAAAGGTCGGCATAGCACTAGCTCAGCAGTCTCCTGTGTTCCGCGAATACATAGATGCATTTGATGGTTATTCATTCCAGTACCCAAGGAGTTGGATTCAAGTCCGTGGTGCTGGGGCTGACATATTCTTTAGGGACCCTTATGTTCTTGATGAAAATCTCTCTCTTGAAATTTCTTCACCTTCATCCTCCCAATACAAGAGTGTTGAAGACTTGGGTCCACCCCAAGAAGCTGGAAAGAAAGTGCTCAAACAATATCTGACTGAGTTTATGTCTACTAGACTCGGTGTTAGACGTGAATCAAATATTCTTTCAACTTCTTCAAGAGTAGCTGATGATGGCAAGTTGTACTATGAAGTTGAGGTAAACATAAAGTCATATGCAAACAACAATGAACTTGCTGTTATGCCACAAGACCGGGTGGCTCGTCTGGAATGGGACCGGAGGTACCTATCTGTTCTTGGAGTTGAAAACAACCAACTGTATGAGTTGAGATTGCAGGTGCCGGAAAATGTGTTTGCAGAGGAGGAAAGTGATCTTCGTAGAGTCATGGATTCGTTTCGAGTCAGCAAGATTGCTGCTTAG 1101 0.4332 MARLAALQQHLLSCSPLTTSLSDLSGTRLHTQHQLKRKLWQPKGTLYVSASSTKKIFNMAGTRFIGVFLSRLLVKEGHRVTLFSRGKAPVTQQLPSESDGDYAVFSSKILHSKGDRKDFEFVKSSLSGEEFDVICINGREADEVEPVLDALPNLEQVSRRKAASLILSTYILSKVGIALAQQSPVFREYIDAFDGYSFQYPRSWIQVRGAGADIFFRDPYVLDENLSLEISSPSSSQYKSVEDLGPPQEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRVADDGKLYYEVEVNIKSYANNNELAVMPQDRVARLEWDRRYLSVLGVENNQLYELRLQVPENVFAEEESDLRRVMDSFRVSKIAA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02722 366 NCBIfam photosystem II reaction center PsbP 161 361 - -
Vian2g02722 366 PANTHER - 156 361 - -
Vian2g02722 366 SUPERFAMILY Mog1p/PsbP-like 187 361 IPR016123 -
Vian2g02722 366 Pfam PsbP 186 361 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Vian2g02722 366 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 61 138 IPR036291 -
Vian2g02722 366 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 180 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02722 Vian-Chr2 48152781 48155722 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02722 - - vra:106757660 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02722 2 48152781 48155722 Vian2g02722 2 48152781 48155722 ECH