Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02720 ATGATCACGATCAACCTTGTTTGCAACTGCACCATGAAACCATCCCCTAAGATCCTAATTGGTCACAAGAATTCATCGTTTCTTGCAAGATGCCACCATACTCTGATCATGTCTATGTCCAATAACTCCACCGCCTGTGGCCTCAATCTCCATCTCAACACCATGCAGTGCCCTTTTCACGTGCGGGAATTTGGACGCATAATGCATGGAAGTCAACAAGTTTTCGGGCTGCTCTCTTCGAGTTTTGGCCAATCAAGTTCCATCGGTTTAAGCGCAACGAGAACCACAAAACGGGGTGTGTCTGCCATTGCCGGGATAGACTTCAAATTCAAGTCTCGTGACTTCTCAAGCTCCGTGGAGACATGTGAGAACATTAATGGTAAAATGGTTTACCTAAAGGATGGCATGAATGTGAAGCCAATAGCGGAGGAAAGGGTTGACAATGACGAGGATAGTGTTGGAGGAGAGGAAGTGTCTGGTTTAGAAGCTGATGAGAAAAATAACAAGAGTGAGAATGAACAAGAGGGTGGGAAGGTAGAGGAGGAGGAGACAGAAGTGGAGAAAGAGGCATGGAGTTTATTGCAAGAGGCACTCGTGACATACTGTGATAAGCCTGTGGGGACGGTGGCAGCGAATGATTCGGAAGATCAACAACCTTTGAATTATGATCAGGTTTTTATAAGGGACTTTATCCCTTCGGCTCTTGCTTTCTTGCTCAAGGGAGAAAAGGAGATTGTCAAGAACTTTCTCCTTTACACCTTGCAACTCCAGAGTTGGGAGAAAACAGTGGACTGCTATAGCCCAGGGCAGGGCCTGATGCCTGCTAGTTTCAAAGTTAAAACTATGAAAGTTGAAGGAAAAAGTGAAGAAGTTTTAGATCCTGATTTTGGGGAATCAGCTATAGGTCGTGTTGCTCCTGTAGATTCAGGATTGTGGTGGATCATCCTGCTGCAGGCTTATGGTAAGATTACTGGGGACTGCAGCTTGCAAGAAAGGTTGGATGTTCAAACAGGCCTAAAAATGATCCTTAATCTGTGCTTAACGGATGGCTTTGATATGTTTCCTTCTCTGTTAGTAACTGATGGATCTTGCATGATAGACAGGAGGATGGGTATTCATGGCCACCCCCTTGAGATTCAGGCCTTGTTTTACTCAGCTCTTCGCTCGGCCCGTGAGATGGTTGCTTCAGATGAAAATTCCAAGAATCTGGTTGGAGAAATTAACAACAGACTCAGTGCACTATCATTTCACATTAGAGAATACTATTGGTTGGATGTGCAAAAGATGAATGAGATATACAGGTATAAAACAGAAGAGTACTCATTGGATGCCACAAACAAGTTCAACATCTATCCAGATCAAATCCCTTTGTGGCTAATTGATTGGGTTCCAACCAACGGAGGATATCTGTTAGGGAATCTGCAGCCAGCTCATATGGATTTCAGGTTTTTCATGCTTGGAAATCTTTGGTCAATCGTTTCCTCTTTGGGCACCCCAGAACAAAATAATTCTATTTTGAATCTGATAGAAGCAAATTGGGATGATCTCGTGGGGGAAATGCCTCTTAAGATATGTTATCCTGCCTTGGAGCATCATGAATGGCGAATAATTACAGGCTCTGACCCCAAGAATACCCCTTGGTCATATCATAATGGTGGGTCCTGGCCAACCCTTCTGTGGCAGTTCACACTTGCATGCATGAAAATGAATAGAACTGAACTGGCAGAGAAAGCAGTTGCTTTGGCTGAGAAAAGACTGCCCCGTGATTCTTGGCCAGAATATTATGACACACCCAATGCAAAATTTATTGGCAAACAAGCCCGGCTTTATCAAACTTGGACTTTAGCTGGGTTCCTTGCATCTAAGATGCTTTTGAAGAATCCTAATTTGGCTTCCTTGTTATGGTGGGATGAGGATTTTGAGATCCTTGAGAATTGTATTTGTTTGCTTCACAAGAGTGGCAGAGTCAAATCCTCTCGTGTCCCTGACAAATCTCAGATTCTCGTGTGA 2010 0.4383 MITINLVCNCTMKPSPKILIGHKNSSFLARCHHTLIMSMSNNSTACGLNLHLNTMQCPFHVREFGRIMHGSQQVFGLLSSSFGQSSSIGLSATRTTKRGVSAIAGIDFKFKSRDFSSSVETCENINGKMVYLKDGMNVKPIAEERVDNDEDSVGGEEVSGLEADEKNNKSENEQEGGKVEEEETEVEKEAWSLLQEALVTYCDKPVGTVAANDSEDQQPLNYDQVFIRDFIPSALAFLLKGEKEIVKNFLLYTLQLQSWEKTVDCYSPGQGLMPASFKVKTMKVEGKSEEVLDPDFGESAIGRVAPVDSGLWWIILLQAYGKITGDCSLQERLDVQTGLKMILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRSAREMVASDENSKNLVGEINNRLSALSFHIREYYWLDVQKMNEIYRYKTEEYSLDATNKFNIYPDQIPLWLIDWVPTNGGYLLGNLQPAHMDFRFFMLGNLWSIVSSLGTPEQNNSILNLIEANWDDLVGEMPLKICYPALEHHEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACMKMNRTELAEKAVALAEKRLPRDSWPEYYDTPNAKFIGKQARLYQTWTLAGFLASKMLLKNPNLASLLWWDEDFEILENCICLLHKSGRVKSSRVPDKSQILV 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02720 669 Pfam Alkaline and neutral invertase 190 628 IPR024746 GO:0033926
Vian2g02720 669 PANTHER - 126 651 IPR024746 GO:0033926
Vian2g02720 669 Gene3D - 214 619 IPR012341 GO:0005975
Vian2g02720 669 SUPERFAMILY Six-hairpin glycosidases 190 620 IPR008928 GO:0005975
Vian2g02720 669 FunFam probable alkaline/neutral invertase B 216 621 - -
Vian2g02720 669 MobiDBLite consensus disorder prediction 159 184 - -
Vian2g02720 669 MobiDBLite consensus disorder prediction 143 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02720 Vian-Chr2 48138358 48141500 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02720 - - gmx:100812691 1098.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02720 2 48138358 48141500 Vian3g01464 3 16034454 16038340 ECH
Vian2g02720 2 48138358 48141500 Vian2g02720 2 48138358 48141500 ECH
Vian2g02720 2 48138358 48141500 Vian3g01464 3 16034454 16038340 PCT