Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02677 ATGCATTCACTGGGATATCGAGCGAACGCGTTGCTGACCTTTGCCGTCACCATTCTGGCTCTTATGTGCGGCATGGCCTCTCTCTCCGACAACTTCAATTCTCCCTCTCCCTCTGCCCAAGTCCAGGTCTTGAACATCAACTGGTTTCAGAAGCAGCCCAACGCCAATGACGAGATCAGCATGACATTGAACATATCAGCAGATTTGCAGTCCCTTTTTACATGGAACACAAAACAGGTTTTTGTTTTTCTTGCTGCCGAGTATGAAACTCCTAAGCATTCCGTGAATCAGATATCTCTATGGGATGGTATTATACCCTCTAAAGAGCACGCCAAGTTTTGGATTCATACATCAAATAAGTACCGCTTCATTGACCAGGGAAGCAATTTGCGCGGCAAAGAATATAACCTGACTATTCATTGGCATGTTATGCCTAAGACTGGCAAAATGTTTGCAGATAAAATAGTCATGCCAGGTTTCAGATTGCCAGAGGAATATAGATGA 504 0.4425 MHSLGYRANALLTFAVTILALMCGMASLSDNFNSPSPSAQVQVLNINWFQKQPNANDEISMTLNISADLQSLFTWNTKQVFVFLAAEYETPKHSVNQISLWDGIIPSKEHAKFWIHTSNKYRFIDQGSNLRGKEYNLTIHWHVMPKTGKMFADKIVMPGFRLPEEYR 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02677 167 Pfam Signal peptidase subunit 1 165 IPR007653 GO:0005787|GO:0006465|GO:0016020
Vian2g02677 167 PANTHER MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23 1 167 IPR007653 GO:0005787|GO:0006465|GO:0016020
Vian2g02677 167 PIRSF SPC3 1 167 IPR007653 GO:0005787|GO:0006465|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02677 Vian-Chr2 47658227 47660376 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02677 K12948 - gmx:100306631 328.561