Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02668 ATGGCCGTTAGAGAGGAGAAAGTCATGGAGGAGAACGGCACAGAGGAAGCGAAGCGATTGATGCTGAAAATTGCGGCCATTCTCGATGAGGCTCGAACATCATACGCCACCCACAACCGAAAGCTCAAGGAACTGTCACTCCTCCGAGCCAAATCCTCTTCTTCGGTCTTCTTTTCCGCCTTCTCCAGAACCCTAACTCCTCTCTTTGATTTCCAGAGGCGCCTTGCCTCTGTTGAACGCGTCGTCTCCTTCGTCTCTGCCCTCGCTGCCTCCGCCTCCGACGAGTTCCTCGATTGCTTCCTCAAGTTCCTCCTAGCTGCCGCTACGGCATCCAACAAAACAGCCAGATTCCGAGCGTGCCAGATCGTCTCCGAGATAATATTGCGGCTTCCAGACGACGCAGAAGTGAGCAATGAGATATGGGATGAGGTGATTGAGTGGATGATGGTGAGGGTACGAGACAAGATCCCTGTGGTGCGTACTTTTGCGGTTAGAGCGCTTTCACGTTTTGTGAACGACTCTGTGAACAGTGACATCCTTGATTTGTACCTCGAGGTGCTCCCTTTGGAACAGAATGCAGATGTTCGGAAGATGATTGTGTTATCTTTGCCACCTTCTACTGCAACTTCTCAAGTTATCATCGACTGTACCTTGGATGTGAGTGAATCTGTACGCAAAGCAGCATACTGTGTTCTAGCTAATAAATTTCCTCTTCAAAGCTTAAGCATTAAACTCAGGACATTAATTCTTCGGAGAGGACTTGCTGATCGATCTCTTGCTGTCTCAAAGGAATGTTTTAAACTATTGAAAGATGAATGGCTTACGAAGTCTTGTAATGGTGATCCTGTAGAACTTTTGAAGTATCTTGATGTTGAAACCTATGAATCTGTTAGTGAGTCTGTGATGGAGGAACTTCTTAAAGCTGGTTTAGTAAAACTACAAAATGGGGCAAGTATCCAGCAGTACATATCGTCAACTGGTGACAGCACTGAAGGAGATACGATTGATTGCCCACCATGCATTCAGCTGATGGAAGCAGAGGCTGCTCTTTATTGGAGGACTGTTTGCAAGCATTTACAGTCAGAAGCGCACGCAAAAGGTTCTGATGCTGCAGCAACAATGGGCACTGAAGCAGAAGTATATGCGGCAGAAGCATCAGATAAAAATGACCTTCTAGAAAAAATTCTTCCAGCAACAGTTAATGAATATATTGAATTGATCAGAGCTCATGCAAATGCCGGATCAAACCATCGGTTTGCGACTCGGCAGCTGCTTTTGCTTGGTGCGATGTTTGATTTTTCCGATGCTACAAATAGAAAGGCTGCTGGTGCATTTCTGCATGAGCTTATGTGCAAGTGTCCTGAGCATGAGGAGGACGATGAAGGGAATATAGTTGTTCTTGGAGATGGGTTAAGTTTTGGTGGAGACATTGATTGGGCCGAAGCTGTAGCCAGTTTCGCAAGGAAAGTCCATGCTGCTGCTGGTGAATTTGAAGAAGTTTTTCTTGCAATCATTGAAGAGCTCGCCCAACCTTGCAAGGAGAGAATAGCAAATCATGTGCAGTGGATGCACAGCCTCTCTCTAACTGGTCTTTTGCTAAAAAATGCAAAATCATTGCGAATACTTCAGGGCAAGGCCATTACACCTGATGAGCTACTCCAAACCTTACTACTTCCTGGGGCGAAACAAGCTCACTTGGACGTGCAAAGGATTGCAGTCAGATGCCTTGGTCTTTATGGCCTTCTTGAAAGGAAACCAAGTGCAGAACTTTTGAAACAGTTGAGGATTTCATATATTAAGGGGCCACATTCAATCAGTATAGAGGCTTGTAGAGCATTAATTGATCTTGTAATGTGGCATGGACCTGAAGAAGTTGACAAGATGTTAAAGCTCAATATTCCATGCCAAATAAACAGTGAGAAGTCGACCTTTTGTCCTGTGAACTTTTCTGATTCAGAAGGGGATTTAGATATTGAGACGCTTGACATCTTATATGGAGGCTTTGAAAATGGTGATTGGGCGAGTCCTTTACCTAGCAACGAAGAAGAATGCGTGCATGCTATACTTGGAGAGGGATTTGCGAAGATTCTTCTCCTAAGTGACAACTATCCAAGTTTACCCATCACTTTGCATCCTGTTATTTTATCAAAACTCATTTACTTGTATTTCAGTGACGTGTCGGAACACTTGCACAGGTGCATAGCGAAGAGTTTCATGCCAGTAATGCGTTCAATGTGGCCAGGAATTTTTGGCAATTATGCTGGTTCTAATTTTACGGTGTCTCAGATGCGTAAGCGTGCTGTTCAAGCTTCTCGTTTTATGCTTCAGATGGTGCAGATTCCCTTGTACGTTAAAGAGGCTCAACCTGACTGTGAAAGTACTACCACGGAACAGCCACAAGTCACAGATAAATGTGCAGAAGTTCCATTTGATTGTGGTGAGGAGGGGCTTGCACTACGCATAGCCGTAGAGGTGGCGAGCTTTTCATCGAAGAAGACAGCTGCTGAGAAGGCTTACGTGTCCGCTTTATGTAGAATACTTGTTTTGCTTCATTTTCGGATATCAGAACAAGGGCCAATAAAATGTATGAGGAAACTTTTACATCACGTGGTTGAATGTGTATCTTCAGAGAAAGACCTACTTAAAGAATTGAAACGCATGTCTGAGCGTCTCAGGACAGTTGATAGCCTCCCAGATAAGGAATTATTGCAAGATGAAGTTAATCTTATTTTGGGGAAATTAGAACTTGAATGTGACCTGGATTTGGGTGGCCCTGTTTCAATGCCACAAACACCAGCTGCACCCCTGACTAGGCCAGCACGTTCCAGGAGAAGGGTGAGGATTGAGGAAGAAAGTTCTGACGAAGAATTACCTTCTGTGGTTCCAACCACCCATCATACTGTAAAAATTCGCTCAGAGAGAGCAAGCAAAACCGCAGCAATTAACAAAATGTCTTCTGCTCGTAGATCGCTCAAGATTGACGAAATGAATGAACAAGTGGAAGAAGACTCTGATGTGACATCTGACGATTCTGATGCATCCGATTAG 3048 0.4449 MAVREEKVMEENGTEEAKRLMLKIAAILDEARTSYATHNRKLKELSLLRAKSSSSVFFSAFSRTLTPLFDFQRRLASVERVVSFVSALAASASDEFLDCFLKFLLAAATASNKTARFRACQIVSEIILRLPDDAEVSNEIWDEVIEWMMVRVRDKIPVVRTFAVRALSRFVNDSVNSDILDLYLEVLPLEQNADVRKMIVLSLPPSTATSQVIIDCTLDVSESVRKAAYCVLANKFPLQSLSIKLRTLILRRGLADRSLAVSKECFKLLKDEWLTKSCNGDPVELLKYLDVETYESVSESVMEELLKAGLVKLQNGASIQQYISSTGDSTEGDTIDCPPCIQLMEAEAALYWRTVCKHLQSEAHAKGSDAAATMGTEAEVYAAEASDKNDLLEKILPATVNEYIELIRAHANAGSNHRFATRQLLLLGAMFDFSDATNRKAAGAFLHELMCKCPEHEEDDEGNIVVLGDGLSFGGDIDWAEAVASFARKVHAAAGEFEEVFLAIIEELAQPCKERIANHVQWMHSLSLTGLLLKNAKSLRILQGKAITPDELLQTLLLPGAKQAHLDVQRIAVRCLGLYGLLERKPSAELLKQLRISYIKGPHSISIEACRALIDLVMWHGPEEVDKMLKLNIPCQINSEKSTFCPVNFSDSEGDLDIETLDILYGGFENGDWASPLPSNEEECVHAILGEGFAKILLLSDNYPSLPITLHPVILSKLIYLYFSDVSEHLHRCIAKSFMPVMRSMWPGIFGNYAGSNFTVSQMRKRAVQASRFMLQMVQIPLYVKEAQPDCESTTTEQPQVTDKCAEVPFDCGEEGLALRIAVEVASFSSKKTAAEKAYVSALCRILVLLHFRISEQGPIKCMRKLLHHVVECVSSEKDLLKELKRMSERLRTVDSLPDKELLQDEVNLILGKLELECDLDLGGPVSMPQTPAAPLTRPARSRRRVRIEEESSDEELPSVVPTTHHTVKIRSERASKTAAINKMSSARRSLKIDEMNEQVEEDSDVTSDDSDASD 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02668 1015 SUPERFAMILY ARM repeat 58 631 IPR016024 -
Vian2g02668 1015 FunFam ARM repeat superfamily protein 70 246 - -
Vian2g02668 1015 Pfam Nuclear condensing complex subunits, C-term domain 525 732 IPR025977 -
Vian2g02668 1015 PANTHER CONDENSIN COMPLEX SUBUNIT 3-RELATED 7 1011 IPR027165 GO:0000796|GO:0007076
Vian2g02668 1015 MobiDBLite consensus disorder prediction 998 1015 - -
Vian2g02668 1015 MobiDBLite consensus disorder prediction 925 1015 - -
Vian2g02668 1015 Gene3D - 65 242 IPR011989 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02668 K06678 - gmx:100812144 1652.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02668 2 47573721 47581083 Vian2g02668 2 47573721 47581083 ECH