Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02667 ATGGTGGCTGTGGTTGCCCAGGAAAATGTTGTGGCATTGGTTTCTCGTACCGGCAGAGAGTTGCAACGTTATAGAAAAGGTCGTCGCCAAGTTGTGGGATGCATACCGTACAGATTTAAGATTGGGCAGAAAACTTCTTTGGACGTTTCTGATGAATTGGAAGTTCTGGTTATCAGTTCTCAGAAGGGAAAAGGGATGCTATTTCCGAAGGGAGGCTGGGAATTGGACGAATCAAAAAAGGAGGCAGCTTTGAGAGAAACCATGGAGGAAGCTGGGGTGAGAGGCATTGTTGGGGGTAAATTGGGTAAATGGAGTTTCAAGAGTAAGACTCATGACACTTTCTATGAAGGCTACATGTTCCCTTTACTTGTTGAAGAGCAATTGGAGTTCTGGCCTGAGCAAAACGTTCGTCAAAGAGTATGGATGAGCGTCACCGAAGCAAGGGATGTTTGTCAACACTGGTGGATGAAGGAAGCTCTAGACAGATTAGTAAACCGTCTTGCTGGTCAAAAAGTCGGTCGTGATAATAAGCAAGTTCTTGGTTCTATGAACTGCACAAGAGATGCCAAATCTGACTTGTAA 582 0.4485 MVAVVAQENVVALVSRTGRELQRYRKGRRQVVGCIPYRFKIGQKTSLDVSDELEVLVISSQKGKGMLFPKGGWELDESKKEAALRETMEEAGVRGIVGGKLGKWSFKSKTHDTFYEGYMFPLLVEEQLEFWPEQNVRQRVWMSVTEARDVCQHWWMKEALDRLVNRLAGQKVGRDNKQVLGSMNCTRDAKSDL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02667 193 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 14 166 - -
Vian2g02667 193 SUPERFAMILY Nudix 21 167 IPR015797 -
Vian2g02667 193 FunFam Nudix hydrolase 17, mitochondrial 14 166 - -
Vian2g02667 193 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 14 168 - -
Vian2g02667 193 ProSiteProfiles Nudix hydrolase domain profile. 27 164 IPR000086 -
Vian2g02667 193 Pfam NUDIX domain 54 161 IPR000086 -
Vian2g02667 193 CDD Nudix_Hydrolase_9 30 157 IPR047198 GO:0016462
Vian2g02667 193 ProSitePatterns Nudix box signature. 71 92 IPR020084 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02667 Vian-Chr2 47536327 47537570 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02667 K07766 - gmx:100795999 363.229