Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02657 ATGGATGAAGAATCTCTGGGTTTTAAGAATGTTACGGGCCACTATGGAAATCTTATCAACGTGACTGATATGTTTATAGAATGTGAAACTGAGCTACTTGACACTGAGGATAAATCTTGTCATCACAACCTAGTTTTCTCTATTGATGGTTTAAATTATTTGCAATCATTGAATTCAATTTCCGAAAGGGGAAGTAACAATCACTTCATAATGGAAATAAGTATTGCAAGACCAAACTCTATGCCGATTAGTTTACAGGAATCTGCATCCTATGGAGATAATTCGCTTGAAGGTGAGAATCCATCTATAGACTCAGAAGAGGAGACTTTGGCACAACCACCTACCCGTGAACAGATAATGGCACTGCTTACTGACGCACAAAGAGAACAACTCACTAAGAAGCTTAGTGAAGCCAACCAGCAAAATCGGTTTCTAAAAAGACAGTTGAAAGTAAAGGAGGATGCATTGGTAAAATTCAAAAGTGAACTTGGAGTCATGGAGCTTGAAATTCAGGCTTTAGCTAGACTAGCAGAAGAAATAGCTCAATGCGGTATTCCAGAAGGTTCAAGGAAGATCAATGGAAAGTACATTCATTCTCACCTTGTTACTAGATTAGAAGCTGTACATGAAAAACTGAAGGAACAAATAAAGGATGTCGATGCCGCACAATCAAAGGAGGTTTCCGTGTTTTGGATTGGCATGGCTGAGAGCGTGCAAGTTATGGGAACCTTTGATGGCTGGAGCCAAGGAGAGCATCTTTCACCAGAATATAATGGTTCTTACACAAAGTTTTCAACAACAATGTTGCTCAGGCCAGGAAGGTATGAAATCAAATTCTTAGTAGATGGTGAATGGCAGCTGTCCCCAGAATTCCCCATTATTGGTGAAGGGTTGACAAAAAATAATTTGTTAGTTGTTGAGTAA 924 0.3918 MDEESLGFKNVTGHYGNLINVTDMFIECETELLDTEDKSCHHNLVFSIDGLNYLQSLNSISERGSNNHFIMEISIARPNSMPISLQESASYGDNSLEGENPSIDSEEETLAQPPTREQIMALLTDAQREQLTKKLSEANQQNRFLKRQLKVKEDALVKFKSELGVMELEIQALARLAEEIAQCGIPEGSRKINGKYIHSHLVTRLEAVHEKLKEQIKDVDAAQSKEVSVFWIGMAESVQVMGTFDGWSQGEHLSPEYNGSYTKFSTTMLLRPGRYEIKFLVDGEWQLSPEFPIIGEGLTKNNLLVVE 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02657 307 Coils Coil 128 162 - -
Vian2g02657 307 FunFam Protein PTST, chloroplastic 219 307 - -
Vian2g02657 307 MobiDBLite consensus disorder prediction 86 109 - -
Vian2g02657 307 SUPERFAMILY E set domains 227 306 IPR014756 -
Vian2g02657 307 PANTHER PROTEIN PTST, CHLOROPLASTIC 68 307 - -
Vian2g02657 307 CDD E_set_AMPKbeta_like_N 226 306 - -
Vian2g02657 307 Gene3D Immunoglobulins 217 306 IPR013783 -
Vian2g02657 307 MobiDBLite consensus disorder prediction 86 112 - -
Vian2g02657 307 Coils Coil 202 225 - -
Vian2g02657 307 Pfam Glycogen recognition site of AMP-activated protein kinase 228 303 IPR032640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02657 Vian-Chr2 47382300 47386954 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02657 - - vum:124834127 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02657 2 47382300 47386954 Vian2g02657 2 47382300 47386954 ECH