Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02632 ATGGTGTCATGTGAAACAGATGGAACAGAACTCATAGTGGCGAACAACTGCAAAGAAAGTGTATGGCCCGCAATTCTCGGCAATGGAGGACACCCTTCACCAAAACATGGCGGGTTTTATCTTGGAAGCGGCGAAGAGGTTGTTGTCCAAGTCCCTGAAGGTTGGTCAGGGAGAATCTGGGGCAGACAAGGGTGTTACTTCGACCAACAAACAGGCAAAGGTTATTGTCAAACAGGAGATTGTGGAGGGCTATTGCAATGCAATGGTATCGGTGGAGTCCCTCCTGCAACCCTAGTAGAAATGACCCTTGGAACCTCAAAATCAGCGTTGCATTTCTATGATGTTAGTTTGGCTGATGGGTTTAACCTTCCAGTGTCAATGAAGCCAGTGAGTGGTAGTGGTGCAGGTTGTGGTGTTGCTGGCTGTGAAGCTAACTTGAACGTTTATTGCCCTTCAGCTTTGGTTGTGGAGAGAAATGGGAAGGTTGTGGGGTGCAAGAGTGCTTGTTTGGCAGCAAAGTCAGATAGGTATTGCTGCACTGGTGAGTTTGCTGGAAGATGCAAGCCAACTGTGTTTGCTCGTCTCTTCAAGACCGTTTGCCCTAATGCTTATAGCTATGCTTTTGATGATTCATCAGTCCTCAAGACTTGTGTGGCACCTCGCTATAACAAACAATTTGAGAAGGCATTGGTCTTGTATGGTGAAGACACACCAGATCGGTGGCATAATATAGCGAAAGAAGTTGGTGATAAATCAGTGGAGGAAGTGAAGAGACACTACGCAATTCTTTTAGAAGATGTAAGTAGAATAGAGTCGGGACATGTTCCAATTCCAGAATACTAG 843 0.4591 MVSCETDGTELIVANNCKESVWPAILGNGGHPSPKHGGFYLGSGEEVVVQVPEGWSGRIWGRQGCYFDQQTGKGYCQTGDCGGLLQCNGIGGVPPATLVEMTLGTSKSALHFYDVSLADGFNLPVSMKPVSGSGAGCGVAGCEANLNVYCPSALVVERNGKVVGCKSACLAAKSDRYCCTGEFAGRCKPTVFARLFKTVCPNAYSYAFDDSSVLKTCVAPRYNKQFEKALVLYGEDTPDRWHNIAKEVGDKSVEEVKRHYAILLEDVSRIESGHVPIPEY 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02632 280 PANTHER OS03G0233200 PROTEIN 10 223 IPR001938 -
Vian2g02632 280 SUPERFAMILY Osmotin, thaumatin-like protein 10 222 IPR037176 -
Vian2g02632 280 SMART tha2 11 220 IPR001938 -
Vian2g02632 280 Pfam Thaumatin family 15 223 IPR001938 -
Vian2g02632 280 CDD TLP-PA 10 226 - -
Vian2g02632 280 ProSitePatterns Thaumatin family signature. 72 87 IPR017949 -
Vian2g02632 280 FunFam Thaumatin-like protein 1a 9 227 - -
Vian2g02632 280 PRINTS Pathogenesis-related protein signature 10 22 IPR001938 -
Vian2g02632 280 PRINTS Pathogenesis-related protein signature 58 69 IPR001938 -
Vian2g02632 280 PRINTS Pathogenesis-related protein signature 111 127 IPR001938 -
Vian2g02632 280 SUPERFAMILY Homeodomain-like 223 271 IPR009057 -
Vian2g02632 280 ProSiteProfiles Thaumatin family profile. 11 225 IPR001938 -
Vian2g02632 280 Gene3D - 225 277 - -
Vian2g02632 280 FunFam Transcription factor SRM1 220 277 - -
Vian2g02632 280 CDD SANT 224 260 IPR001005 -
Vian2g02632 280 Gene3D Thaumatin 10 224 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02632 Vian-Chr2 47038185 47039673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02632 11 226 Receptor kinase-like Gene Family AT5G38280 39.286 5.80e-43 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02632 - - gsj:114381056 400.593