Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02629 ATGAAGAGTAGTTACTGTGATGTGATATTGCAGTTGAACCTGAATGGATCTGGAGCAGGAGCTTCAGCTCCCAGTTCAGCTTTCTTTGGCACAAGCTTGAAGAAGGCTGTTGCCTCAAGGGTCCCTAACAGCAAGGTGACGAATGGAAGCTTCAAAATTGTTGCTTCTGAGAAAGAGATTGAGGAGACCAAGCAGACCAAGCAGACCAACAAGGACAGATGGAGGGGTCTGGCCTACGATATCTCTGATGACCAACAAGACATCACAAGGGGGAAGGGTATGGTTGATCCTCTTTTCCAAGCTCCAATGGAGGCTGGAACTCACTATGCTGTCATGAGCTCCTACGAGTACCTTAGCACTGGACTCCGCCAGCTTGACAACATAGAGGATGGTTTCTACATTGCTCCTGCTTTTCTGGACAAGCTTGTTCCTCTCATTCTTGGTATCTGGGGAGGCAAGGGACAAGGAAAATCTTTCCAATGTGAGCTTGTCTTTGCCAAGATGGGAATCAACCCCATCATGATGAGTGCTGGAGAGTTGGAAAGTGGAAATGCCGGAGAGCCAGCAAAATTGATCAGGCAGAGATACCGTGAAGCTGCAGATCTGATCAACAAGGGAAAGATGTGTGCTCTGTTCATCAACGATCTTGATGCAGGAGCAGGTCGTCTTGGTGGAACCACCCAATACACTGTGAACAACCAGATGGTGAATGCCACTCTCATGAACATAGCTGATAACCCTACAAATGTGCAGCTTCCTGGTATGTACAACAAGGAAGAGAACCCCCGTGTGCCCATCATTGTCACTGGTAACGATTTCTCAACATTGTATGCTCCTCTCATTCGTGATGGGCGTATGGAGAAGTTCTACTGGGCACCAACAAGGGATGACCGCGTTGGTGTTTGCAAGGGAATTTTCCGCACCGATGGTGTTCCTGAAGAGGACATTACAAAGCTTGTTGACACCTTCCCAGGCCAATCCATTGATTTCTTTGGTGCACTGAGGGCCAGAGTGTATGATGATGAAGTGAGGAAGTGGGTTTCTGGTGTTGGTGTTGATGGTATTGGGAAGAAGCTTGTGAACTCAAAAGAAGGACCTCCTACCTTTGATCAGCCCAAGATGAGTCTGGACAAGCTCTTGCAGTATGGTAACATGCTTGTCCAAGAACAAGAAAATGTGAAGAGAGTCCAATTGGCTGACAAGTACTTGAATGAGGCTGCTCTTGGAAATGCTAACGAAGATGCTATTAAGAGTGGATCTTTCTTCAAATAG 1272 0.4701 MKSSYCDVILQLNLNGSGAGASAPSSAFFGTSLKKAVASRVPNSKVTNGSFKIVASEKEIEETKQTKQTNKDRWRGLAYDISDDQQDITRGKGMVDPLFQAPMEAGTHYAVMSSYEYLSTGLRQLDNIEDGFYIAPAFLDKLVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLINKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWVSGVGVDGIGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFFK 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02629 423 PANTHER - 20 410 IPR044960 -
Vian2g02629 423 Pfam ATPase family associated with various cellular activities (AAA) 149 290 IPR003959 GO:0005524|GO:0016887
Vian2g02629 423 Gene3D - 294 406 - -
Vian2g02629 423 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 325 IPR027417 -
Vian2g02629 423 FunFam Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 294 406 - -
Vian2g02629 423 Gene3D - 123 293 IPR027417 -
Vian2g02629 423 FunFam Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 124 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02629 Vian-Chr2 47020607 47022980 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02629 - - gmx:100797222 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02629 2 47020607 47022980 Vian2g02629 2 47020607 47022980 ECH