Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02626 ATGGCGAACCCAGAGGGTAGTAGCAGAGGTTCAAGATGGTCACTTAAGGGAACCACTGCTCTCGTTACTGGAGGCACACGTGGAATCGGGCATGCTGTGGTGGAGGAACTGGCGGAGTTTGGTGCCACGGTGTACACTTGTTCCAGGAATGAAGAGGAGCTGAATGCACGCTTGAAGGAATGGAAAGAGAAAGGGTTTTTGGTTTCTGGGTCGGTTTGTGATGTGACTTCTCCAGCCCAAAGAGAGAACCTCATTAAACAAGTGGACTCTGCCTTCAACGGCAAGCTCAACATACTTGTAAACAATGTGGGAACAACTGTGAGGAAACCAACAATAGAGTATACTACTGAAGATTATTCAAAATTGATGGCAATTAACTTGGACTCTGCATACCATCTCAGCCAACTTGCATATCCTCTTCTTAAAGCATCTGGAAATGGAAGTATTGTGTTCATTTCCTCTGTTGCAGCTGCTATTGATCAGCTTTCTAGATATCTTGCGTGTGAATGGGCGAAAGACAACATAAGGAGCAACAGTGTTTCACCCTGGTATACCAACACATCAGTTCATACACAGTTGCTTACAAATAAGGAAATTGTTAACGAGATAATATCTCGAACGCCAATAAAGCGAATTGCAGAAGCACATGAAGTGTCATCCTTGGTGGCTTTCCTTTGTTTGCCGGCAGCTTCTTACATCACTGGACAAGTTATTTGTGTTGATGGAGGATTTACTGTGTATGGATTTCAACCCAGCGTGAATAATGTTGGAACAAACGTGAGGAAGCCAACAATAGAGTATACAACCGAAGAATATTCAAAATTAATGGCAACTAACTTGGACTCTGCATACCATCTGAGCCAACTTGCACATCCTCTTCTTAAAGCATCTGGAAATGGAAGTATCGTGTTCATTTCCTCCGTTGCAGGTCAGAGAAGTGTAGGTTCTGGAGCCATTTATGCATCAACTAAAGCTGCAATGGATCAGCTTACCAAGTATCTTGCATGTGAATGGGCCAAGGACAATATAAGGAGCAACAGTGTTGCACCCTGGTATACCAAAACGCCACTTGCGGAAGCTTTGCTTGCAAACAAGGAATTTGTTAACGAAGTAATATCTCGTACGCCAATAAAGCGAATTGCAGAAGCACATGAAGTGTCATCCTTGGTAACTTTTCTTTGCTTGCCAGCAGCTTCTTACATCACTGGACAAGTTATTTGTGTTGATGGAGGATTTACAGTGAATGGATTTCAACCCACCATGAGAATTACTTAA 1275 0.4298 MANPEGSSRGSRWSLKGTTALVTGGTRGIGHAVVEELAEFGATVYTCSRNEEELNARLKEWKEKGFLVSGSVCDVTSPAQRENLIKQVDSAFNGKLNILVNNVGTTVRKPTIEYTTEDYSKLMAINLDSAYHLSQLAYPLLKASGNGSIVFISSVAAAIDQLSRYLACEWAKDNIRSNSVSPWYTNTSVHTQLLTNKEIVNEIISRTPIKRIAEAHEVSSLVAFLCLPAASYITGQVICVDGGFTVYGFQPSVNNVGTNVRKPTIEYTTEEYSKLMATNLDSAYHLSQLAHPLLKASGNGSIVFISSVAGQRSVGSGAIYASTKAAMDQLTKYLACEWAKDNIRSNSVAPWYTKTPLAEALLANKEFVNEVISRTPIKRIAEAHEVSSLVTFLCLPAASYITGQVICVDGGFTVNGFQPTMRIT 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02626 424 PRINTS Glucose/ribitol dehydrogenase family signature 208 228 IPR002347 -
Vian2g02626 424 PRINTS Glucose/ribitol dehydrogenase family signature 19 36 IPR002347 -
Vian2g02626 424 PRINTS Glucose/ribitol dehydrogenase family signature 173 190 IPR002347 -
Vian2g02626 424 PRINTS Glucose/ribitol dehydrogenase family signature 152 171 IPR002347 -
Vian2g02626 424 PRINTS Glucose/ribitol dehydrogenase family signature 94 105 IPR002347 -
Vian2g02626 424 Gene3D - 252 423 - -
Vian2g02626 424 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 248 IPR036291 -
Vian2g02626 424 PANTHER TROPINONE REDUCTASE 12 248 IPR045000 GO:0016491
Vian2g02626 424 FunFam Short-chain dehydrogenase reductase 5 248 - -
Vian2g02626 424 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 253 415 IPR036291 -
Vian2g02626 424 Gene3D - 8 248 - -
Vian2g02626 424 FunFam Short-chain dehydrogenase reductase 252 418 - -
Vian2g02626 424 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 320 339 IPR002347 -
Vian2g02626 424 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 IPR002347 -
Vian2g02626 424 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 IPR002347 -
Vian2g02626 424 Pfam Enoyl-(Acyl carrier protein) reductase 253 413 - -
Vian2g02626 424 Pfam Enoyl-(Acyl carrier protein) reductase 26 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02626 Vian-Chr2 46972058 46980542 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02626 253 419 Miscellaneous Gene Families AT2G29290 67.456 1.09e-76 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02626 K08081 - pvy:116121713 525.013