Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02604 ATGGAGCAGGAGATTGAGAAGAAAAAGAGAGATAAAAGTGAAGATGAGAAATGGGTGCATGATGCATCTGTGGATTATAAGAACAGAGTTCCTCTACGTTCTTCCACCGGTGCATGGAAAGCTGCTCTTTTTGTCCTCATGATGCATGAAGACCTAAAAACAGCGACCAAGAACGTAAACTACTGGTTAGGAGCAACAACATTGATGCCTCTGATTGGGGGATTTGTTTCAGATGCCTACACAGGTCGATTTCATATGATTATCTTTTCTTCCCTCGTATACCTCAAGGGAATAAGCCTGCTGACTATGTCTCAACTCATTCCAAGTCTAAAACCATGCAACAATGAGATATGTGATCGAACAAGGAAGGTTCATGAAGTGGTTTTCTTCCTAGCCCTTTACTGCATCGCCTTGGCTACTGGAGGATTCAGACCGTCCTTACAAAGCTTTGGTGCTGATCAATTTGATGACGATCACCTTGAAGAACGAAAGAAGAAGATGTCTTTCTTTAACTGGTGGTCTTTTACACTGTGCTCTGGAATGGTGTTTGGGGTACAGGAGGACAGAAGGAAACCCTTTAATGCAAATTCTTCAGTCGGAGAATTCCCAGTTGAAGATACAGAGGAGAAAGAGAATCCATGGAGATTAGCAACAGTGACAAGAGTGGAGGAGACAAAGCTTATTGTGAATGTTGTTCCCATATGGTTAACTACATTAATAATAGGTGTATGCATAGCTCAGAGCCAGACACTGTTTGTCAAACAAGCAGCTGCTATGAACTTAAATATAGGTCACAATTTCAAAATCCCAGCAGCTTCCATGGTGTCTGTTACCGCTATTTGCACTATGATATCTGTCCCAACATATGATAAGATTATTGTGCCAGTTCTGAGGAAAGTCACAGGTAACGAAAGAGGCATCAGCATCCTAAGGAGGATTGGCATAGGCTTAACATTGTTACTCATAATCATGGTTGTTGCTGCCTTGGTAGAAAGAAAGAGATTAAGAATGGTTGGACATGAAGTTGTGACAGAAGGGGGAAGAAAGCATGAGACTATGAGTGTGTTGTGGTTGGTACCCCAATACTTGATGATTGGAATTGGAGGAGATACACTTTCGATAGTTGGTTTACAAGAGTATTTCTACGACCAAGTTCCTGACTCGATGAGAAGCTTGGGAATAGCTTTATATCTGAGTGTGTTTGGAGTAGGATACTTCTTAAGCAGCTTTCTGATAATAATTGTGGACAATGTAACGGGGAAGAATGGCAAAAGTTGGATTGCAAAGGATATAAATTCAAGCCGTCTAGATTTGTTTTATTGGTTGTTGGCCATCATAAATGCTCTAAATTTGTGTCTCTTTATATTTTTGGCAAAAAGGTATACTTATAAGACTGTGCAGAGGAAAAATGGAAATTGA 1419 0.4045 MEQEIEKKKRDKSEDEKWVHDASVDYKNRVPLRSSTGAWKAALFVLMMHEDLKTATKNVNYWLGATTLMPLIGGFVSDAYTGRFHMIIFSSLVYLKGISLLTMSQLIPSLKPCNNEICDRTRKVHEVVFFLALYCIALATGGFRPSLQSFGADQFDDDHLEERKKKMSFFNWWSFTLCSGMVFGVQEDRRKPFNANSSVGEFPVEDTEEKENPWRLATVTRVEETKLIVNVVPIWLTTLIIGVCIAQSQTLFVKQAAAMNLNIGHNFKIPAASMVSVTAICTMISVPTYDKIIVPVLRKVTGNERGISILRRIGIGLTLLLIIMVVAALVERKRLRMVGHEVVTEGGRKHETMSVLWLVPQYLMIGIGGDTLSIVGLQEYFYDQVPDSMRSLGIALYLSVFGVGYFLSSFLIIIVDNVTGKNGKSWIAKDINSSRLDLFYWLLAIINALNLCLFIFLAKRYTYKTVQRKNGN 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02604 472 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 208 463 - -
Vian2g02604 472 Gene3D MFS general substrate transporter like domains 189 471 IPR036259 -
Vian2g02604 472 Gene3D MFS general substrate transporter like domains 10 186 IPR036259 -
Vian2g02604 472 SUPERFAMILY MFS general substrate transporter 63 464 IPR036259 -
Vian2g02604 472 Pfam POT family 85 178 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vian2g02604 472 Pfam POT family 210 423 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02604 Vian-Chr2 46759957 46762111 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02604 205 467 Organic Solute Cotransporters AT3G53960 53.759 8.83e-94 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02604 K26562 - gmx:100804663 376.326