Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02565 ATGGCGACGATGGATCCGCTGATGACGCCGTTGGGGCAAATGCTATTGGAGGAGATTACTCCGGTGGTGATGCTCATTTCAACTCCTTCTGTCGAAGAAGCTTCCCGCAAGAACGGCCTCTCCTTCCTCCAGATGCTAACGCCGTTCTGCTCCTTCGACAACATCGATGTGCCTGTTAGGACTGCCAGTGACCAACCCTATCGCCTTCACAAGTTCAAATTGCGCTTGTTCTACGCTTCCGATGTTAGGAGGCCTGATTTGAAGGAAGCTAAAGAGCAATTGAAGCAAGTTATCTCGGAGGCCGGGGAGAAAGAGTTTCCTGACTCGAATTCAGATTTGCCGGAAATTAATCTTGAACTTTCCTCGAGTTCTGAATACGAAAATACACCATCCTGGTTCCGGTTTCTCAATAAAGAGCTTGTCCGTGTGGCTTCCTTTTCAGATCATGAAGCTTTTGACCATCCCGTGATATGTCTTCTTGCTGTCTCTTCTAAGGATGAGCAACCTATTAACAGATTTGTTGACTTTTTTAATACCAATAAGCTTCCTTCCCTTCTTAATGATGGATCAATGGATCCAAAAATTTCAAAGCATTACTTGTTGGTGCATGATAATCAAGATGGTCCTGCAGACAGAGCAAATAAAATATTGACAGAAATGAGGAGTACATTTGGTTCTGGCGATTGTTCATTGCTTTGTATTAATTCTTCCCTGGAGGCTCCGTTCAAACATCAAGATAATCCTTGGGCCTCCTATATAACTAATTCCTCATCTAGTCCCACTCAAGATGTTGGTTGCTTTCTGAACATGGATGATATCGATGAGATTAAAGTTCTAATGCAAGATTTATCATCTAAGCACATAATTCCAAATATGGAGCAAACAATTCGTATACTCAATCAACAGGTTTCTGCAACACGGAAAGGGTTTAGAAACCAAATAAAAAATTTATGGTGGAGAAAAGGGAAAGAAGACGGTGCAGATTCTCTCAATGGTCCCGTGTATAACTTTAATTCCATTGAATCCCAGATTCGAGTTTTGGGTGATTATGCTTTTATGTTACGAGATTATGAACTTGCCTTGTCAAATTATCGCCTAATTTCCACAGATTACAAGATTGATAAAGCCTGGAAGCGCTATGCTGGTGTGCAGGAAATGATGGGGCTTACATACTTCATATTGGATCAATCAAGAAAGGAAGCTGAGTATTGCATGGAAAACGCATTTAACACATATTTAAAGCTTGGATCATTGGGTCAGCTAAATGCAACACGATGTGGCCTGTGGTGGATAGAAATGTTAAAGGCACGTGATCAATATAAAGAGGCAGCTACTGTTTATTTTCGTATTTGTGGTGAGGATATCCTACATTCTGCTGTGATGCTTGAACAAGCATCATACTGCTACTTGTTGTCTAAACCCTCCATGTTACGCAAATATGGATTTCATCTAGTGCTTTCTGGCGAGCAGTATAAAAAGTGTGATCAGATTAAACATGCAATTCGAACCTACCGATGTGCACTTTCTGTTTTTAAAGGAACTACTTGGAATTATATCAATGATCATGTTCATTTCCATATAGGACAGTGGTATGCTTCCCTTGGGATGTATGACGTGGCTGTCAAGCATATGACGGAAATTTTGTGCTGTAGCCACCAGTCCAAGACAACACAGGAACTATTCCTAGGCGACTTTCTTCATATTGTGGAGAAAACTGGACGAACATTTGAGGTAACAAAGCTTCAATTGCCTGTAATCAACATCTCTACACTCAGGGTAATCTATGAAGATCACCGGACCTTTGGATCCCCTTCAGCTGCTAATATTAGAGAAGCCTTGTGGCATTCTTTGGAGGAAGAAATGCTGCCATCATTCTCTGCTGCCAAGACTAATTGGTTGGAGTTGCAATCAAAGCTTATATTAAAAAAGCACAGTCAAAATGTTTGTGTTGCAGGCGAAGCTGTGAAGGTGACTATTGAATTTAAAAATCCTCTGCAAATCTCAATTCCCATATCTAGTGTTACACTTGTATGCAAGTATTCTGCCAGTACTGATGAAGTGATATCAAATGAAAATGAGTCAAGTATGGAGAAAGATAATAAGGTTGACCACTTTAGAAATATGAGCTCTGACAATTCCTCATTTATGGTTTCTGAGGTTGATTTCTTACTAGGAGGTGGTGAAACAACCATGATCCAACTATCAGCTACTCCCAGGGAAGAGGGTACTCTTGAAATTATTGGTGTTAGGTGGAAACTGTCTGGGACAATTGTGGGCTTTTACAACTTTGAGATGGTTTTTTCCTTTCCAAAATCCCAGAGCATACCGAAGCTTCAGGGTTCCATCCACCCTTTACCTGGAAAGGCATATGCTGGAGATTTACGGCAGCTTGTTTTGGAATTGAGGAATCCATCGGAGTTTCCTGTTAAGAATCTGAAGATGAAGATAAGTCATCCTAGGTTCCTTATAATTGGGAAGCAGGAAAATATGATGTCGGAGTTTCCTGCGTGTTTAAGAAAGAAGACAGATTCAGTACAAAGTGTTATGCATGATAATCCTAATATCACTACTGACACAGTTTTTTTGTTTCCAGAGGGTACATCAGTTCAAGGTGAAACACCCTTCTTGTGGCCTCTTTGGTTTAGGGCTGCTGTTCCAGGTGATATATCTCTTTGCATGAGCATATATTATGAGATAGGAGATGTATCAAGTATCATAAAGTATCGCACTCTTCGCTTGCATTACAATGTGCAGGTGTTACCATCATTGGATGTCTCATTTCAAATCTGTCCTTTCCGATCAAGATTGGAAGAATTTCTTGTTCGATTGGATGTTGTTAATAAGACTAGCTCAGAAAGTTTCCAAGTTTGTCAGTTGTCATCAGTTGGTCATCAATGGGAAATCTCATTAGTTGAAGCTCCGGATAGTATTTTTCCTTTACAATCATTGATGGCTGGTCAAGCGATATCATGTTTCTTTACACTAAAGTGGAAGGAATTGCGAGTGATTCGTGTGTTCCTAAATGAGGATTTGCACATGAGCTGCTTTTTGGACTTGCCAGGAGATTCCTGTGTTTTGTTCTCTGCATGTCCATGGGTTTGTGAGAGGCAAGGAGAAGGGTTTTTGGTGAGAGGCAAGGAGAAGGGTTTTTGGTTGCTGAATTATGTTATCCCTTGCCCTCAGAAATCAAGTAGGCTTTCGACATTTGGGGATGACGTGTCTACATCCCCTGTCAAAAGTGATGCAAGATTGGTACCCGAAAGCATAAAGGATATAGTTTATGATGTAAACAGTGCACCTTTGGTCAATTTCCACCATTATGAAAGATTGCAGCAGGAAGTTTCATACAAGGGTGACTTAAATACTGTGGATTTTGTATTAATCTATCGGCCATTTAGGAGTAGCGACGATCCTGGTTTCTCCACTTCTTCGTCTGTAATGTCCCATCACGCGTGCCATTTCAGTACTGCTAGCACGGGTCCCATTTCATGGCTAGTGGATGGACCTCAAACCATGCATCATGACTTCTCTGCATCATTCTGTGAAATAAATATGAAGATGCATATTCACAATTCATCTGGTGCCACTACTTTTGTACGCATTGACACCTTAGATTCAGCGGGTAATAGTGGACAGATAAACAATGTAAATGTGGTTCAATCTGCAACTACCGATAACCAAGCAGGATGGCACGATATCGCCCCAGTGAATGAACTCAAAGTCGCCTCAAATGCTCTTGAAACCCAACCAGGAAAAGCACTATCATTGGAAAGTGCCTCCTCATATATTTGGTCTGGATCAAGCTCAACCCATCTCCACATTGAGGCTATGTCCTCGGTAGAAATTCCTCTTCAGATCTGTGTATTCTCTCCTGGAACATATGACCTGTCAAATTACGTTTTGAATTGGAAACTTCCATCCAATGGACAGGGAGATAGTGATGAAAAGAGGCAGCATTCAGGCCAGTGCCAGGGGTATAAATACTATCTTACCGTGCTCCAGTCCATTTGA 4011 0.4116 MATMDPLMTPLGQMLLEEITPVVMLISTPSVEEASRKNGLSFLQMLTPFCSFDNIDVPVRTASDQPYRLHKFKLRLFYASDVRRPDLKEAKEQLKQVISEAGEKEFPDSNSDLPEINLELSSSSEYENTPSWFRFLNKELVRVASFSDHEAFDHPVICLLAVSSKDEQPINRFVDFFNTNKLPSLLNDGSMDPKISKHYLLVHDNQDGPADRANKILTEMRSTFGSGDCSLLCINSSLEAPFKHQDNPWASYITNSSSSPTQDVGCFLNMDDIDEIKVLMQDLSSKHIIPNMEQTIRILNQQVSATRKGFRNQIKNLWWRKGKEDGADSLNGPVYNFNSIESQIRVLGDYAFMLRDYELALSNYRLISTDYKIDKAWKRYAGVQEMMGLTYFILDQSRKEAEYCMENAFNTYLKLGSLGQLNATRCGLWWIEMLKARDQYKEAATVYFRICGEDILHSAVMLEQASYCYLLSKPSMLRKYGFHLVLSGEQYKKCDQIKHAIRTYRCALSVFKGTTWNYINDHVHFHIGQWYASLGMYDVAVKHMTEILCCSHQSKTTQELFLGDFLHIVEKTGRTFEVTKLQLPVINISTLRVIYEDHRTFGSPSAANIREALWHSLEEEMLPSFSAAKTNWLELQSKLILKKHSQNVCVAGEAVKVTIEFKNPLQISIPISSVTLVCKYSASTDEVISNENESSMEKDNKVDHFRNMSSDNSSFMVSEVDFLLGGGETTMIQLSATPREEGTLEIIGVRWKLSGTIVGFYNFEMVFSFPKSQSIPKLQGSIHPLPGKAYAGDLRQLVLELRNPSEFPVKNLKMKISHPRFLIIGKQENMMSEFPACLRKKTDSVQSVMHDNPNITTDTVFLFPEGTSVQGETPFLWPLWFRAAVPGDISLCMSIYYEIGDVSSIIKYRTLRLHYNVQVLPSLDVSFQICPFRSRLEEFLVRLDVVNKTSSESFQVCQLSSVGHQWEISLVEAPDSIFPLQSLMAGQAISCFFTLKWKELRVIRVFLNEDLHMSCFLDLPGDSCVLFSACPWVCERQGEGFLVRGKEKGFWLLNYVIPCPQKSSRLSTFGDDVSTSPVKSDARLVPESIKDIVYDVNSAPLVNFHHYERLQQEVSYKGDLNTVDFVLIYRPFRSSDDPGFSTSSSVMSHHACHFSTASTGPISWLVDGPQTMHHDFSASFCEINMKMHIHNSSGATTFVRIDTLDSAGNSGQINNVNVVQSATTDNQAGWHDIAPVNELKVASNALETQPGKALSLESASSYIWSGSSSTHLHIEAMSSVEIPLQICVFSPGTYDLSNYVLNWKLPSNGQGDSDEKRQHSGQCQGYKYYLTVLQSI 1336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02565 1336 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 643 755 IPR013935 -
Vian2g02565 1336 PANTHER TRANSPORT PROTEIN TRAPP 8 1335 IPR024420 -
Vian2g02565 1336 Pfam ER-Golgi trafficking TRAPP I complex 85 kDa subunit 190 524 IPR024420 -
Vian2g02565 1336 Gene3D Tetratricopeptide repeat domain 334 558 IPR011990 GO:0005515
Vian2g02565 1336 SUPERFAMILY TPR-like 435 556 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02565 K20305 - gmx:100809666 1758.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02565 2 46335583 46357327 Vian2g02565 2 46335583 46357327 ECH