Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02558 ATGGCGACGCATCCGCAAACTCCGACCTCATCGAACGCCTTCTCCTTCCTGTCGAAGGGCTGGCGCGAGGTTCGAGACTCGGCGGACGCTGATATCCAACTCATGCGTGACCGAGCGAACTCGTTCAAAGACCTAGCCACGTCGTTCGACCGTGAGCTCGAGAACTTCTTCAATTCCGCAACGCCGCCGTTCTCGGTTCCGGCCATGCGCTCTCCGCCGCCTAGGGAGATCGAGTTCGTCAAGAGTCTGCGCCCGAAGCTGTCGGAGATTCGACGCGCCTACTCCTCACCCGATTTCAGCAAGAGGGTTCTGGAGAAATGGAGCCCGAGGTCGCGGATTCGAATCGACCTTTCCGCGATAAAGAAGGCTATTGTGTCGGCGGAGGAAGATGGGATTGTGGATTTCGAGAAGAGGGGAAGGAGGTTGAGTTTCTGGGAGGAGTGGAAAAACGAGGGCGAGGGTGAATCGAAGGACTGGGAGCCGATTCGTGCATTGAAGATCAGGCTCAAGGAGTTTGAGAAGCGCGGTTCTTCTTTCGAGGCTTTCAAGAACAGTGAATTCTTGGAGAAAGTCAAGTCTGGCTTGAAATCAATGTGCAAGGAGCCTGAGGAGTCAAAGGAAGTGCCACCATTGGATGTACCCGAACTTCTTGCCTACTTTGTAAAACAGTCTGGGCCATTTCTGGACCATCTTGGAGTGAAAAGAGACGTATGTGACAAGATAGTTGAAAGTTTGTATAGCAAACGCAGAAACCATCTTCTAGTGCAATCCCTATCTGGGGAAGAGTCTTCTATTGTTGGGAATGGAAACATAAATGATGAATTGGATTTACGAATAGCAAGCGTCCTTCAGAGCACAGGACACCGTCACGAAGGTGGATTCTGGACAGACCATGCTAAGCATGATCCGTCTGATAGTGAAAGGCATGTTGCAATAGTCACAACTGCTAGTCTTCCTTGGATGACAGGAACAGCTGTAAACCCCCTATTTCGAGCTGCATATTTATCACAATCTGCAAAGCAGAAAGTCACTCTGTTGGTTCCATGGCTTTCTAAATCAGATCAAGAGCTTGTTTATCCCAGCAGTCTTACTTTTACTTCACCAGAAGAACAGGAAGTTTACATACGTAGCTGGCTTGAAGAAAGGATTGGTTTTAAGGCAGACTTCAAAATTTCTTTTTATCCTGGGAAGTTTTCAAAGGAAAGACGGAGTATAATACCTGCTGGAGATACTTCTCAATTTATACCATCCAAGGATGCTGACATTGCTATCCTGGAAGAGCCGGAACATTTAAATTGGTATCATCATGGCAAACGTTGGACTGACAAATTCAACCATGTTGTTGGTATTGTTCACACAAATTACTTGGAATATATCAAGAGGGAGAAAAATGGAGCACTCCAGGCATTCTTTGTGAAACACATAAACAACTGGGTTACAAGAGCATACTGCCACAAGGTTCTTCGTCTCTCAGCTGCTACTCAGAATTTACCCAAGTCTGTAATTTGCAATGTTCATGGTGTGAATCCAAAGTTCTTGGAAATTGGAGAAAAAATTGCTGCAGAGAGGGAGCTTGGGCAGAAATCCTTTACAAAAGGGGCGTATTTCTTGGGAAAGATGGTGTGGGCAAAGGGATATAAGGAGTTGATAGATTTATTAGCAAAGCATAAGGCGGACCTTGACGGCTTCAAGTTGGATGTGTTTGGAAATGGAGAGGATGCTAATGAAGTTCAGAGTGCAGCTAGGAAGTTAGATTTGAATCTCAGCTTTCAAAAAGGAAGAGATCATGCAGACGATTCTCTTCACGGGTACAAAGTTTTTATAAATCCTAGCATTAGCGATGTGCTATGCACTGCTACAGCTGAGGCACTTGCCATGGGAAAATTTGTAGTTTGTGCAGATCATCCGTCAAACGAGTTCTTCAGGTCATTTCCCAACTGTTTGACGTACAGGACGTCCGAAGACTTTGTGGCAAAAGTAAAAGAAGCATTAGAAAACGAGCCGTATCCTCTAACACCTGAGCAAAGATATCAACTTTCTTGGGAGGCCGCTACTCAAAGATTTATGGAATATTCTGAGCTTGACAGCATCCTGAATAAGGAAAATAATGGTGAAAAGTCAAGCCTGGATAAAGGAAAGCTCGTTCCCAAGTCAGTTTCAATGCCTAATCTGACGGAACTAGTGGATGGAGGCTTAGCATTTGCTCACTATTGTCTCACTGGGAATGAATTCCTGAGATTATGCACAGGAGCAATACCTGGGACACGTGACTACGATAAACAGCATTGTAAAGACCTTCATCTTTTGCCGCCGCAGGTAGAAAATCCCATCTATGGCTGGTGA 2343 0.4563 MATHPQTPTSSNAFSFLSKGWREVRDSADADIQLMRDRANSFKDLATSFDRELENFFNSATPPFSVPAMRSPPPREIEFVKSLRPKLSEIRRAYSSPDFSKRVLEKWSPRSRIRIDLSAIKKAIVSAEEDGIVDFEKRGRRLSFWEEWKNEGEGESKDWEPIRALKIRLKEFEKRGSSFEAFKNSEFLEKVKSGLKSMCKEPEESKEVPPLDVPELLAYFVKQSGPFLDHLGVKRDVCDKIVESLYSKRRNHLLVQSLSGEESSIVGNGNINDELDLRIASVLQSTGHRHEGGFWTDHAKHDPSDSERHVAIVTTASLPWMTGTAVNPLFRAAYLSQSAKQKVTLLVPWLSKSDQELVYPSSLTFTSPEEQEVYIRSWLEERIGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGIVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCHKVLRLSAATQNLPKSVICNVHGVNPKFLEIGEKIAAERELGQKSFTKGAYFLGKMVWAKGYKELIDLLAKHKADLDGFKLDVFGNGEDANEVQSAARKLDLNLSFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNEFFRSFPNCLTYRTSEDFVAKVKEALENEPYPLTPEQRYQLSWEAATQRFMEYSELDSILNKENNGEKSSLDKGKLVPKSVSMPNLTELVDGGLAFAHYCLTGNEFLRLCTGAIPGTRDYDKQHCKDLHLLPPQVENPIYGW 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02558 780 FunFam Digalactosyldiacylglycerol synthase 1, chloroplastic 508 666 - -
Vian2g02558 780 FunFam Digalactosyldiacylglycerol synthase 1, chloroplastic-like 397 507 - -
Vian2g02558 780 Gene3D Glycogen Phosphorylase B; 532 686 - -
Vian2g02558 780 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 2, CHLOROPLASTIC 8 778 IPR044525 GO:0046481
Vian2g02558 780 CDD Glycosyltransferase_GTB-type 439 641 - -
Vian2g02558 780 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 310 690 - -
Vian2g02558 780 Pfam Glycosyl transferases group 1 535 669 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02558 Vian-Chr2 46226307 46232488 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02558 12 602 Glycosyltransferase AT3G11670 68.750 0.0 831
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02558 K09480 - gmx:100796354 1493.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02558 2 46226307 46232488 Vian2g02558 2 46226307 46232488 ECH