Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02551 ATGTCGGTGAAGGAGTGCCACCACCACAAGGGAAAGAAGCACAAGCTCTTCAAACGCATATTCTGGTGTATAGTGATCTTCGCGTTCATCGTGCTGCTCACGGTTCTCATAATCTGGGCGATTCTGAAGCCCACAAAGCCAACCTTCATCCTCCAAGACGTCACCGTCTTCGGCTTCAACGCCACCGTCCCCAACCTCCTCACCTCAAGCTTTCAGGTGACGCTTTCCTCGCGCAACCCCAACGACAAAATCGGCATCTACTACGACCGTCTCAGCACCTACGTCAGCTATAGGAACCAGCAAGTCACGTACCGAACCTCAATCCCTCCCTCCTACCAAGGTCACAAGGAAGAAGACGTGTGGTCCCCTTTCGTCTATGGAAACAACGTCCCCGTCGCGCCCTACAATTTCCTTGGCCTCAGTCAGGATCAGTCTGACGGCAACGTCCTCGTCATCGTTAAAGTCGACGGTAAAGTCCGATGGAAGGTCGGCTCCTTTACCTCTGGCCACTACAATCTCTACGTAAGGTGCCCTGCTTTCATAACCTTTGGCCCTCGAAGCACCGGGATTGCTCTCGGCAATAACGCCGTTAAGTATCAACTGGTTCAGCGCTGCACCGTCGGGGTTTGA 630 0.5349 MSVKECHHHKGKKHKLFKRIFWCIVIFAFIVLLTVLIIWAILKPTKPTFILQDVTVFGFNATVPNLLTSSFQVTLSSRNPNDKIGIYYDRLSTYVSYRNQQVTYRTSIPPSYQGHKEEDVWSPFVYGNNVPVAPYNFLGLSQDQSDGNVLVIVKVDGKVRWKVGSFTSGHYNLYVRCPAFITFGPRSTGIALGNNAVKYQLVQRCTVGV 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02551 209 PANTHER OS05G0367900 PROTEIN 18 196 IPR044839 GO:0098542
Vian2g02551 209 Pfam Late embryogenesis abundant protein 74 177 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02551 Vian-Chr2 46166173 46166802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02551 12 177 EF-hand Containing Proteins AT5G21130 22.222 1.37e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02551 - - gmx:100795832 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02551 2 46166173 46166802 Vian2g02551 2 46166173 46166802 ECH