Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02545 ATGGAAGACACCAAATCCAGGTTCAAGAGGATTTGCGTCTTCTGTGGCAGCAGTTCAGGAAAAAAACCTACCTATCAAGAAGCTGCCGTTCAACTTGGCAGGGAGCTGGTGGAAAGAAGAATTGATTTGGTGTATGGAGGTGGCAGCGTGGGGCTGATGGGTCTCGTTTCTCAGGCTGTTCATGATGGTGGGCGCCATGTTCTAGGGGTTATCCCAACAAGTCTTATGCCCATAGAGATAACAGGTGAACCTATTGGGGAAGTGAGAGCCGTATCTAATATGCACCAAAGGAAAGCTGAGATGGCTCGTCAAGCCGATGCCTTTATTGCCCTCCCAGGAGGATATGGAACCCTTGAAGAATTGCTGGAAGTCATTACATGGGCTCAGCTTGGGATCCACAGCAAACCCGTGGGGCTTTTGAATGTGGATGGATTTTACAATTCCTTGTTGTCTTTCATAGACAAGGCCGTTGATGAAGGCTTTATATCTCCTAAGGCACGACGCATTATCGTGTCAGCACCCACAGCCAAAGAATTGATGGTAGAACTAGAGCAGGAACATGTCCCTGAGCAAGATGAGTTTGCATCCAAGTTGGTGTGGGAGGAAAGACTAAATTTCGTGACTGAATCAGAAGTGACCATGTGA 645 0.476 MEDTKSRFKRICVFCGSSSGKKPTYQEAAVQLGRELVERRIDLVYGGGSVGLMGLVSQAVHDGGRHVLGVIPTSLMPIEITGEPIGEVRAVSNMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHSKPVGLLNVDGFYNSLLSFIDKAVDEGFISPKARRIIVSAPTAKELMVELEQEHVPEQDEFASKLVWEERLNFVTESEVTM 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02545 214 Gene3D - 1 185 - -
Vian2g02545 214 SUPERFAMILY MCP/YpsA-like 7 181 - -
Vian2g02545 214 Pfam Possible lysine decarboxylase 53 181 IPR031100 -
Vian2g02545 214 FunFam CASP-like protein 1 185 - -
Vian2g02545 214 NCBIfam Rossman fold protein, TIGR00730 family 9 184 IPR005269 GO:0009691|GO:0016787
Vian2g02545 214 PANTHER LOG FAMILY PROTEIN YJL055W 4 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02545 Vian-Chr2 46117357 46121029 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02545 K22522 - gmx:100792663 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02545 2 46117357 46121029 Vian2g02545 2 46117357 46121029 ECH