Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02535 ATGGCCCTATCCCGTGGATCCATCCTCACTCGATCAGTGTGGTCCTCTAATTTGGAATCGGAATTCGAGTTAATCCGATCCGTCATAGACTCCTTCCCTCTGATATCGATGGACACCGAGTTCCCGGGTGTTGTCGTGCGCCCCGACACCGGCGACCCCTCCTTTCGCCACCGCGAACCAGCCGCGCACTACGCCGTGCTTAAAGCCAACGTCGACCGCCTGCACCTGATCCAGATCGGTCTCACTCTCTCCGATCAACTGGGAAACCTTCCGACACTCGGCACCTCCAATGGCTTCGTCTGGGAGTTCAACTTCCGAGACTTCGACGTCTCGCGTGACGCCCATGCTCACGACTCCGTCGAGTTGTTACGGCGTCAAGGCATCGATTTTGAGAAGAATCGGGAGTTTGGAATCGACTCGGTCCGGTTCGCCGAGCTTATGATGTCCTCTGGTCTGGTCTGCGATGACCCAGTTAGCTGGGTGACGTTTCACAGTGCCTATGATTTCGGGTACCTCGTGAAATTGTTGACCCAGCGCGCTCTGCCGGAGGAATTGGCAGAATTTCTCCGTCTGGTGAGGGTGTTTTTCGGTGACAGAGTCTTTGATGTGAAGCACTTGATGAAGTTCTGCTCAAATCTTCATGGAGGTTTGGACCGAGTATGCCAATCGCTGAATGTGGAAAGAGTTGTGGGGAAAAGCCACCAGGCTGGTTCCGATAGCTTGCTCACTCTGCACGCTTTTCAGAATATAAGAGAGGTTTATTTTGGCAAGGCTGATGGTCTTGTTCAGTATGCTGGTGTCTTGTATGGTTTGGAGGTTTTCTAA 825 0.5297 MALSRGSILTRSVWSSNLESEFELIRSVIDSFPLISMDTEFPGVVVRPDTGDPSFRHREPAAHYAVLKANVDRLHLIQIGLTLSDQLGNLPTLGTSNGFVWEFNFRDFDVSRDAHAHDSVELLRRQGIDFEKNREFGIDSVRFAELMMSSGLVCDDPVSWVTFHSAYDFGYLVKLLTQRALPEELAEFLRLVRVFFGDRVFDVKHLMKFCSNLHGGLDRVCQSLNVERVVGKSHQAGSDSLLTLHAFQNIREVYFGKADGLVQYAGVLYGLEVF 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02535 274 Pfam CAF1 family ribonuclease 13 138 IPR006941 -
Vian2g02535 274 SUPERFAMILY Ribonuclease H-like 11 271 IPR012337 -
Vian2g02535 274 Gene3D - 2 273 IPR036397 GO:0003676
Vian2g02535 274 FunFam Putative CCR4-associated factor 1 7 1 274 - -
Vian2g02535 274 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 10 272 IPR039637 GO:0004535|GO:0030014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02535 Vian-Chr2 46016692 46017516 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02535 K12581 - gmx:100790027 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02535 2 46016692 46017516 Vian2g02535 2 46016692 46017516 ECH