Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02529 ATGGCAATCGAATTGCACTTCACACTCATACTTTTTTCTCTGTTTTTGGTGTCCTCTTTCACCTTTCCTTTGCCCCCTATTCTACCCAGATTTCCCTCTTCAGCAGTCAGTGCAGAGCTAAAGCAACGCTCTCATTCTGCTCCAAATACCCCATACAGAACCAAGTTCTTCACTCAAATACTCGATCACTTCAATTTCAATCCCCAGAGCAATCACGTTTTTCAACAAAGGTATCTCATCAATGATACCTTCTGGGGTGGTGCCAAAAACAATGCTCCAATCTTTGTCTACACGGGAAATGAAGGGAACATAGAATGGTTCACTGAGAACACAGGCTTCATGTTCGAAAATGCTCCTTCTTTTCATGCCCTTTTGGTTTTTATTGAGCATAGATTCTACGGAAAATCAATACCATTTGGGGGAAACAGGAAGGTTGCATACGCAAATGCTACCACACTGGGGTATTTGAGCTCCACACAGGCATTAGCCGATTATGCCACTCTCATCATTGATTTGAAGAAGAATTTGTCAGCAACTGATTCTCCCGTTGTGGTGTTTGGAGGATCCTATGGAGGAATGTTGGCAGCTTGGTTCAGGATGAAGTATCCACACGTTGCAATTGGAGCTCTGGCATCCTCTGCTCCCATTCTCCAATTCATGGATTTGGTTTCACCAGATATCTTCAACAGCATCATCTCGCAAGATTTCAGAAGCGAGAGTGAGAATTGTTACAAAGTGTTAAAAGGGTCATGGAAACTAATAGAGCAGACGGCCAACAAACCCGAGGGACTGGAACTGTTACAGAAATCATTCAGAATTTGCAAAAGCAATGATTTTGGGGCAGGTTCTCTGGAAGGATGGCTTAGGACGGCGTGGGTTTATACAGCTATGACAGATTATCCCACACCATCCAATTTCCTCAATCCCTTGCCAGCATATCCCATAAAAAAGATGTGTGAAGCCATAGAAGGGACAGAAAAGGGAAAAAATGATGAATTGGAGAAGCTGTACGCAGCAGTGAGTCTATTCTACAACTATACAGGCACTGCCACGTGTTTCGATTTGGATGATGATTCAGACCCGCACGATCTCGGGGGATGGCAATGGCAGGCGTGTACGGAGATGATAATGCCCGTAGGTGGAAGCAATAAGCACAGCATATTCCCAGAATATAAGTGGTCATACGAAGACAGAGAGTCTTCATGCCAATTTTTCTACAATGTTACGCCTAGACCACACTGGATTACCACTGAGTTTGGTGGCCATGCCATTCAGACAGTTCTGAAAAGCTCTGCAAGCAACATTATATTCTTCAATGGTTTAAGAGATCCTTGGAGTGGTGGAGGGGTGTTAAAGAATATATCAAAAACTATAGTTGCTCTTGTTGAAAAAAGTGGAGCTCATCATGTAGACTTAAGGTACTCCACTAAGGAAGATCCAAAGTGGCTTAAAGATGTAAGGAAACAGGAGATAAAGATCATTGCAAGTTGGATCTCTCAATACCATCAAGACCTACACTCCAATAACTAA 1530 0.4301 MAIELHFTLILFSLFLVSSFTFPLPPILPRFPSSAVSAELKQRSHSAPNTPYRTKFFTQILDHFNFNPQSNHVFQQRYLINDTFWGGAKNNAPIFVYTGNEGNIEWFTENTGFMFENAPSFHALLVFIEHRFYGKSIPFGGNRKVAYANATTLGYLSSTQALADYATLIIDLKKNLSATDSPVVVFGGSYGGMLAAWFRMKYPHVAIGALASSAPILQFMDLVSPDIFNSIISQDFRSESENCYKVLKGSWKLIEQTANKPEGLELLQKSFRICKSNDFGAGSLEGWLRTAWVYTAMTDYPTPSNFLNPLPAYPIKKMCEAIEGTEKGKNDELEKLYAAVSLFYNYTGTATCFDLDDDSDPHDLGGWQWQACTEMIMPVGGSNKHSIFPEYKWSYEDRESSCQFFYNVTPRPHWITTEFGGHAIQTVLKSSASNIIFFNGLRDPWSGGGVLKNISKTIVALVEKSGAHHVDLRYSTKEDPKWLKDVRKQEIKIIASWISQYHQDLHSNN 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02529 509 Gene3D Serine carboxypeptidase S28, SKS domain 224 392 IPR042269 -
Vian2g02529 509 Gene3D alpha/beta hydrolase 56 498 IPR029058 -
Vian2g02529 509 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 37 504 - -
Vian2g02529 509 FunFam Dipeptidyl peptidase 7 224 391 - -
Vian2g02529 509 Pfam Serine carboxypeptidase S28 59 488 IPR008758 GO:0006508|GO:0008236
Vian2g02529 509 SUPERFAMILY alpha/beta-Hydrolases 111 472 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02529 Vian-Chr2 45932871 45936785 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02529 K01285 - gmx:100781698 878.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02529 2 45932871 45936785 Vian2g02529 2 45932871 45936785 ECH