Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02519 ATGTTCCTTCTTCTTTTATTTTTTTATTTCTCAATTTATATTTTAAATTATGTTACTGACTCTTTCCTGCATCTGATGCGAATAAATGGGTGTTCTGGGACTGTTATCGTCTTTTCAGTCCTTGCTGGGTTGGCTTTTATGTTTTCAGCTAGCATTTTGCTTCAGATTCTGGCATGTGCAATATATAACAATTGGTGGCCCATGTTATCAGCTCTGATGTATGTGCTTGTACCTATGCCTTGCTTATTCTTTGGAGGTGGATCCACTCAATTTCTAATGAGCCGTGATGGTGGGGGTTGGATAGATGCTGCAAAATTTTTGACTGGAGCATCAGCCGTTGGGAGCATAGCCATTCCTATAATCCTCAAGCATGCACATATGATTGAGACAGGCGCGATGCTCATTGAGCTTGTATCGTTCTTCATATTTATATGCACTGTTTTATGTTTCCACCAAGCCAACCTTGATGATGATTGGTAA 480 0.3958 MFLLLLFFYFSIYILNYVTDSFLHLMRINGCSGTVIVFSVLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWIDAAKFLTGASAVGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVLCFHQANLDDDW 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02519 159 Pfam Vacuolar protein sorting 55 42 153 IPR007262 -
Vian2g02519 159 PANTHER LEPTIN RECEPTOR-RELATED 40 158 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02519 Vian-Chr2 45839514 45840810 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02519 41 150 EF-hand Containing Proteins AT1G32410 57.273 7.30e-40 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02519 - - gmx:100306519 244.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02519 2 45839514 45840810 Vian2g02519 2 45839514 45840810 ECH