Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02514 ATGTACTTCAACGGATTCTACCATTTATTCTATCAATACAATCCGAACGGTTCGGTGTGGGGGAACATAGTGTGGGCACACTCAGTATCGAAGGATCTGATAAACTGGGAAGCTGTTGAACACGCGCTGTACCCATCCAAGTCTTTCGACAAATATGGGTGTTGGTCGGGCTCGGCGACAATAGTCCCAGGTATTGGACCCGTAATCCAGTACACTGGAGTCGTAGACGAGAAACAAACTCAAGTCCAATGTTACGCTATACCCGAAGACCTCAAGGACCCGCACCTCCGGAAATGGGTAAAACCCGATGGTTCCAACCCGTTTGTGGTCGCCGACAACCCTGTGAACGGTAGTGCGTTTAGGGACCCGACAACGGCTTGGTGGAGCAAAGATGGACACTGGAGAATAGTGGTGGGTAGCAGAAGGAAGGATAGAGGAGTGGCTTATATGTACAGAAGCAAAGACTTTAAGAAATGGGTTCGGTCCAGACACCCGCTCCATTCGAGGAAAGACACGGGTATGTGGGAGTGCCCCGATTTTTACCCCGTTTCGCTTAAAAGCAATTTGGGGTTGGACGCGTCGGCGGAGGGAAATCAAACGAAACACGTGCTGAAAAATAGTCTTGATTTGACTAGGTATGAGTACTACACTGTGGGAACATATCGTAGGGATAAGGATAGGTATGTTCCTGACAAAACATCAGAAGATGGTTGGGGTGGATTACGGTATGATTATGGTAATTTTTATGCTTCCAAGTCCTTTTTTGATCCTAGCAAGAACAGAAGAGTGATATGGGGTTGGGCAAACGAGTCTGATACCAAAGAAGACGATGTTCGTAAAGGATGGGCAGGGATTCAGGCAGATCTGGAGGTTGAATTTTCAATTCCAAATTTGGAGAAGGCAGAGAAATATGATGACAAGTGGGTTGATGCACAGGAAGCTTGTGCCAATAAGGGTTCAAATGTGGAAGGTGGTGTTGGACCATTTGGGCTTTTGACTTTGGCTTCTGAAAAGCTGGAGGAGTTTACTCCTGTGTTTTTCAGAATTTTCAAAGATAAAAAGAAGCATGTCATTCTCATGTGCTCTGATGCAACAAGATCGTCTTTAAAGGGTGATTTGTATAAGCCGATATTTGGTGGCTTTGTGGACTTGGATTTGACAAAGGATAAGAAAATTTCTCTTAGGAGTTTGATTGATCACTCGGTAGTGGAAAGTTTTGGAGCAGGAGGAAAGACAATCATATTGTCTCGAGTTTATCCACAGCTTGCAGTGTTAAAGCAAGCTCATCTTTTTGTGTTCAACAATGGCACTGAACCAATCACCATGAAAAAGCTAAAAGGATGGGACATGAAATCTGCTCAAATAAAATGA 1371 0.4457 MYFNGFYHLFYQYNPNGSVWGNIVWAHSVSKDLINWEAVEHALYPSKSFDKYGCWSGSATIVPGIGPVIQYTGVVDEKQTQVQCYAIPEDLKDPHLRKWVKPDGSNPFVVADNPVNGSAFRDPTTAWWSKDGHWRIVVGSRRKDRGVAYMYRSKDFKKWVRSRHPLHSRKDTGMWECPDFYPVSLKSNLGLDASAEGNQTKHVLKNSLDLTRYEYYTVGTYRRDKDRYVPDKTSEDGWGGLRYDYGNFYASKSFFDPSKNRRVIWGWANESDTKEDDVRKGWAGIQADLEVEFSIPNLEKAEKYDDKWVDAQEACANKGSNVEGGVGPFGLLTLASEKLEEFTPVFFRIFKDKKKHVILMCSDATRSSLKGDLYKPIFGGFVDLDLTKDKKISLRSLIDHSVVESFGAGGKTIILSRVYPQLAVLKQAHLFVFNNGTEPITMKKLKGWDMKSAQIK 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02514 456 Pfam Glycosyl hydrolases family 32 N-terminal domain 1 287 IPR013148 -
Vian2g02514 456 Pfam Glycosyl hydrolases family 32 C terminal 281 448 IPR013189 -
Vian2g02514 456 Gene3D Glycosyl hydrolase domain; family 43 1 303 IPR023296 -
Vian2g02514 456 SUPERFAMILY Arabinanase/levansucrase/invertase 1 286 IPR023296 -
Vian2g02514 456 CDD GH32_Fruct1-like 1 291 - -
Vian2g02514 456 SMART glyco_32 1 410 IPR001362 GO:0004553|GO:0005975
Vian2g02514 456 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 1 287 - -
Vian2g02514 456 Gene3D - 309 451 - -
Vian2g02514 456 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 274 450 - -
Vian2g02514 456 SUPERFAMILY Concanavalin A-like lectins/glucanases 274 453 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02514 Vian-Chr2 45787502 45789436 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02514 1 451 Glycoside Hydrolase AT3G52600 59.653 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02514 K01193 - gmx:100777418 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02514 2 45787502 45789436 Vian2g02514 2 45787502 45789436 ECH