LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian2g02509	ATGACGGAAGTGCTTCAGTTGCCTTCATCGTCAAGCTGTGGTGGTCTCACACCCAATGATGGGTCGCACCCAAGTTCCCTTATTAACGCTCCCACTGTGGAAGAAGGGGTGCTGCCACAGTCCCCTTTGGATTTGGAAGCTGAAGAAGAAGAAGAGGACGAAGAAGAGAGAAAAAGGGAAAGAGAAAGGGATCAGCTTTCTATTTTGACCCTTTTGATAGCTACGTTTCGGAAGTCTCTGATTGGCTGCAGCACTACAGCTTCATCTACTTCTTCCATGGAGATTGGGTGGCCTTCCAATGTGAGGCACGTGGCTCATGTCACCTTCGATCGCTTCCATGGGTTTCTTGGTTTGCCTGTTGAATTTGAACCAGAAGTTCCCAGGAGGTCTCCCAGTGCTAGTGCAAATGTTTTTGGAGTTTCAACAGATTCTATGCAGCTCTCTTTTGACGCCAGAGGAAATAGTGTACCTACAATACTGCTGTTAATGCAAAGACATTTGTATGCACAAGGAGGCCTGCAGGCTGAAGGAATCTTCAGAATCAATGCTGAAAACGGTCAAGAGGAGTTTGTGAGGGAAGAATTGAACAGAGGAGTTGTACCAGATGGCATTGATGTGCACTGCTTGGCAGGTCTCATAAAGGCTTGGTTCAGAGAACTACCTACTGGGGTATTGGACCCTCTCTCACCTGAGCAGGTAATGCAATCCCAGTCAGAAGAAGAATGTGCTCAGCTTGTGAGGCTTCTTCCTCCAACAGAAGCTGCCTTGCTAGATTGGGCAATAAACTTAATGGCAGATGTTGCTCAAATGGAAAGCTTGAACAAGATGAATGCACGTAATATTGCAATGGTTTTCGCACCAAACATGACCCGAATGGCAGATCCTTTGACTGCTTTAATGTATGCAGTACAAGTCATGAATTTTCTCAAGACACTGGTCGTAAAGACACTTAGGGAAAGAGAGGAGTCTATTGTAAAATCAAATCCTGGTCCAAACCTTAATTCTTTTGACGATGATGGACACCATAGCAATTCAGAAATGCTACACAAGGTTGACAGTGAAGGTGGAAATGATTGTAGTGACGATGAGGAAGATACACTATTTGTCACTGCAGAGCCATCTCAACAAAGCCCCAGTCATCTTACTGAAGATGCCTGTGAAACTGAATCCAAAAGTTTGCCGACATCTACCGAAAATTTGATTTCTGCAGGAACTAGGTTGTTGGTTGACAGTTGTCCCTGCAATCTTTTATCTGAAATTTGTTCTTTGGCAATTGGGCTTCAAGACTGTGGCCTCACCACTGGGCAGACAAAGGGGGATCCTGCAAAATTTTGCAGGAGCAAAAGCCTTCAGTTGAGTACTTATGATATAGAGAAATGTCCCAAAAAGGTGGTTGAGCTTCCGGTAGCAGGAGCTGCAGAGAAGAACCTCGGAACTGCCATCATTGGGCGATTAAATTCAAGAACAGAGTTGGCTGAAGCTTGGCGTTGA	1491	0.4514	MTEVLQLPSSSSCGGLTPNDGSHPSSLINAPTVEEGVLPQSPLDLEAEEEEEDEEERKRERERDQLSILTLLIATFRKSLIGCSTTASSTSSMEIGWPSNVRHVAHVTFDRFHGFLGLPVEFEPEVPRRSPSASANVFGVSTDSMQLSFDARGNSVPTILLLMQRHLYAQGGLQAEGIFRINAENGQEEFVREELNRGVVPDGIDVHCLAGLIKAWFRELPTGVLDPLSPEQVMQSQSEEECAQLVRLLPPTEAALLDWAINLMADVAQMESLNKMNARNIAMVFAPNMTRMADPLTALMYAVQVMNFLKTLVVKTLREREESIVKSNPGPNLNSFDDDGHHSNSEMLHKVDSEGGNDCSDDEEDTLFVTAEPSQQSPSHLTEDACETESKSLPTSTENLISAGTRLLVDSCPCNLLSEICSLAIGLQDCGLTTGQTKGDPAKFCRSKSLQLSTYDIEKCPKKVVELPVAGAAEKNLGTAIIGRLNSRTELAEAWR	496

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian2g02509	496	Pfam	RhoGAP domain	157	291	IPR000198	GO:0007165
	Vian2g02509	496	Pfam	P21-Rho-binding domain	94	121	IPR000095	-
	Vian2g02509	496	Gene3D	CRIB domain	89	124	IPR036936	-
	Vian2g02509	496	FunFam	Rho GTPase-activating protein 5	125	318	-	-
	Vian2g02509	496	CDD	RhoGAP	157	312	-	-
	Vian2g02509	496	CDD	CRIB	93	133	-	-
	Vian2g02509	496	MobiDBLite	consensus disorder prediction	323	393	-	-
	Vian2g02509	496	MobiDBLite	consensus disorder prediction	1	29	-	-
	Vian2g02509	496	Coils	Coil	43	65	-	-
	Vian2g02509	496	ProSiteProfiles	Rho GTPase-activating proteins domain profile.	140	325	IPR000198	GO:0007165
	Vian2g02509	496	SUPERFAMILY	GTPase activation domain, GAP	135	313	IPR008936	-
	Vian2g02509	496	SMART	RhoGAP_3	154	317	IPR000198	GO:0007165
	Vian2g02509	496	MobiDBLite	consensus disorder prediction	369	393	-	-
	Vian2g02509	496	PANTHER	MKIAA1688 PROTEIN	1	380	IPR044785	GO:0005096
	Vian2g02509	496	ProSiteProfiles	CRIB domain profile.	95	108	IPR000095	-
	Vian2g02509	496	MobiDBLite	consensus disorder prediction	339	356	-	-
	Vian2g02509	496	Gene3D	Rho GTPase activation protein	127	326	IPR008936	-
	Vian2g02509	496	SMART	PBD_5	95	129	IPR000095	-
	Vian2g02509	496	MobiDBLite	consensus disorder prediction	1	62	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian2g02509	Vian-Chr2	45747468	45751201	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vian2g02509	-		-	gmx:100783118	847.425

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vian2g02509	2	45747468	45751201	Vian2g02509	2	45747468	45751201	ECH