Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02502 ATGTCGGGGAAGAGAAAGAGGAAGTTGAAATTGCTAAGCGACACAATCACAGACAATAGAAGGTCAGTTGATGAGATGAAAAGTGAACATTTGGAGCTGCAATCCTGGGCTGATCTCCCTGCTGAACTCTTAGAACTAATCTTGTCCCGATTGATCCTTGCTGATAATATCCGTGCTTCTGCTGTTTGCAAGAGATGGCATTCTGTTGCTAGTGATGTCCGTGTAGTAAGCCAATCACCATGGCTTATGTATTTTCCAAAGTTTGGTGACTGTTATGAATTCTATGATCCTGTGCAGCGTAAGACCTACACCCTTGAGTTGCCAGAGTTGAATGGATCCAGAGTTTGTTATACAAAAGATGGTTGGTTGTTGCTATACCGGCCCCGAACTCACCGAGTATTCTTCTTCAATCCCTTTACTCGGGAGCTGATAAAACTGCCAAGATTTGAGATGACATACCAGATTGTTGCCTTCTCTTGTGCCCCAACATCACCTGACTGTGTTCTGTTTACTGTTAAGCATGTTAGTCCTACTGTTGTGGCTATTAGCACTTGTTATCCTGGGGCGACAGAATGGACCACTATTAATCACCCAAATCGCTTGCCCTTTGTCAGTAGCATTTGGAATAAACTTGTGTTTTGTAATGGGTTATTTTATTGTTTGAGCCTCACAGGTTGGCTTGGGGTGTTTGACCCGGTTGAATGTATTTGGAGTGTTCTAGCAGTACCTCCACCTAAATGCCCAGAGAATTTTTTTGCCAAAAACTGGTGGAAGGGGAAATTTATGACAGAGCACGGAGGAGATATATTAGTAATCTATACATGCTGTAGTGAGAACCCCATTATTTTCAAGTTAGATCAGACATTAATGAAATGGGAAGAGATGAGAACTCTAGATGGAGTAACTCTTTTTGCTAGTTTTTTGTCTTCTCATTCCAGGACCGACCTCATTGGAGTAATGAGGAACAATGTCTACTTCTCTAAAGTTCGTTTCTATGGGAAGCGTTGCATATCATTCTCTCTTGATGACTATAGATACTATCCCCGTAAACAGTGTCATGACTGGGGAGAACAAGATCCTTTTGAGAACATCTGGATTGAACCACCAAAGGACTTTTCGGCTTGCATGTGA 1131 0.4209 MSGKRKRKLKLLSDTITDNRRSVDEMKSEHLELQSWADLPAELLELILSRLILADNIRASAVCKRWHSVASDVRVVSQSPWLMYFPKFGDCYEFYDPVQRKTYTLELPELNGSRVCYTKDGWLLLYRPRTHRVFFFNPFTRELIKLPRFEMTYQIVAFSCAPTSPDCVLFTVKHVSPTVVAISTCYPGATEWTTINHPNRLPFVSSIWNKLVFCNGLFYCLSLTGWLGVFDPVECIWSVLAVPPPKCPENFFAKNWWKGKFMTEHGGDILVIYTCCSENPIIFKLDQTLMKWEEMRTLDGVTLFASFLSSHSRTDLIGVMRNNVYFSKVRFYGKRCISFSLDDYRYYPRKQCHDWGEQDPFENIWIEPPKDFSACM 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02502 376 SUPERFAMILY F-box domain 30 128 IPR036047 GO:0005515
Vian2g02502 376 Pfam F-box-like 36 72 IPR001810 GO:0005515
Vian2g02502 376 Gene3D - 35 75 - -
Vian2g02502 376 SMART fbox_2 39 79 IPR001810 GO:0005515
Vian2g02502 376 PANTHER OS09G0392200 PROTEIN 24 370 IPR044619 -
Vian2g02502 376 CDD F-box_SF 37 71 - -
Vian2g02502 376 ProSiteProfiles F-box domain profile. 33 84 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02502 - - gmx:100796538 741.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02502 2 45703442 45705511 Vian2g02502 2 45703442 45705511 ECH