Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02489 ATGGAACACATTCCTGTGGAAGTGATCGGTAACATATTGTCTCTTCTCGGCTCTGCTCGGGATGTAGTGGTTGCTTCTGCAACTTGCAAGAAATGGAAGGAAGCATGGCGCAGTCATCTCCACAGTCTTTCTTTCAATTTTAGTGATTGGCCTCCCTATAATGACTATTCCTGTGCTAGGTTGGAAATACTCATCACTCAGACCATTTTTCAAACCAAGGCACTGCAGTTTTTGACCATTTTCATGGATGATGACCGTGAGTTCTCTGCCGCCCCCGTCATTGCTTGGCTTATGTATACTAGGGATTCCTTGCGCCAATTGCATTACAATGTAAGGACTGTCCCTTGTTTCAACATCATCGAGAAATGCAGCAGGCACAGGCTGGAGGTGCTGGCATTGGCTCGCAATTCCATCATTGGGGTTGAGCCAGGTTATTTGAAGTTTCCTTGCTTGAAGTCGCTTTCGTTGAGTTTTGTTAGCATCTCGGCGTTGGATTTGAGCCTTCTGATGTCGTCTTGTCCAAAGCTTGAAACATTGGCTATGGTTAGTCCAGATATTGCAATATCAGATTCTCAGGCTTCTGTGGAGCTTAGCAGTCTTTCTTTGAAGGATTTCCACCTTGAATTGTTTAGCTCGGATAAGTTTATATTGGAGGTGGATTTGCTCGAGAAACTTCATTTGAAAGAATGTACTTTTGAGATTTTTGAGCTGGTTGGAAAGGGGACACTGAAAGCGTTGAAAATTGATGACGTGAATGTCATGCATCTCGATATTGCGGATAGTACGGAGAACCTTGAGATTATAGATGTTTGTAACTTCACAATCATGTGGCCAAAATTTTATCACATGATCTCAAAAGCCTCAAAGTTACATAAGCTTCGGCTGTGGGGTGTTGTTTTTGATGATGAGGATGAGGTTGTTGATATAGAGACAATTTCTGTTTGCTTTCCTCTATTGACGCATTTGTCGTTAAGTTATGATTTAAGAGATGGAGTGCTTCATTATGGCTTGCAGGGTTTGTCTTGTTTGATGAATGTGGTGGTGTTAGAACTTGGATGGACTGTAATCAGTGATCTTTTCTCAGTTTGGGTAGCTGGACTTTTGGAAGGATGTCCCAATTTGAAAAAATTGGTTGTACATGGTCATGTTTCAGAGGTAAAAACACATGAAGAGTGCCAAATTCTTTCCAGATTCTCTGAATTCATTCTTCAACTGGGAAGAAAATATGGGCATGTAAAATTTGAGTTTGAATATGAGTAG 1260 0.4135 MEHIPVEVIGNILSLLGSARDVVVASATCKKWKEAWRSHLHSLSFNFSDWPPYNDYSCARLEILITQTIFQTKALQFLTIFMDDDREFSAAPVIAWLMYTRDSLRQLHYNVRTVPCFNIIEKCSRHRLEVLALARNSIIGVEPGYLKFPCLKSLSLSFVSISALDLSLLMSSCPKLETLAMVSPDIAISDSQASVELSSLSLKDFHLELFSSDKFILEVDLLEKLHLKECTFEIFELVGKGTLKALKIDDVNVMHLDIADSTENLEIIDVCNFTIMWPKFYHMISKASKLHKLRLWGVVFDDEDEVVDIETISVCFPLLTHLSLSYDLRDGVLHYGLQGLSCLMNVVVLELGWTVISDLFSVWVAGLLEGCPNLKKLVVHGHVSEVKTHEECQILSRFSEFILQLGRKYGHVKFEFEYE 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02489 419 Gene3D Ribonuclease Inhibitor 103 182 IPR032675 -
Vian2g02489 419 Gene3D Ribonuclease Inhibitor 183 405 IPR032675 -
Vian2g02489 419 SUPERFAMILY F-box domain 2 62 IPR036047 GO:0005515
Vian2g02489 419 PANTHER F-BOX PROTEIN-LIKE 3 389 - -
Vian2g02489 419 SMART fbox_2 4 45 IPR001810 GO:0005515
Vian2g02489 419 SUPERFAMILY RNI-like 115 382 - -
Vian2g02489 419 Pfam F-box-like 2 36 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02489 Vian-Chr2 45590099 45591358 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02489 - - gmx:100792331 739.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02489 2 45590099 45591358 Vian2g02489 2 45590099 45591358 ECH