Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02483 ATGTTGGTGCAAAGAATGTGCATGCTAGGGTTCTTGCTAATCGTCGGAATCTTCGAACTCGACGCCGTTTATGGTTACAATCGACCACCACCTCGTCAAAACCTCTTTATTCCAAACTTGGATCACTCCGACTTGCCACAACAGGTACACATATCTCAAGTGGGAGAAAACAAGATGAGGATATCGTGGATCACAGACAGCCCAACTTCACCAAAGGTTTCCTACGGTCCATCTCCTTCAGCAAATGCATTATCTGTCACAGGGACTACCTCGTCCTACCGTTATCTCTTTTACAAGTCCGGTGAAATTCATGACGTTGTAATTGGTCCCCTCAACCCCAACACTGTCTACTACTACCGTTTGGGTGATCCACCCTCTTCCCTAACATACAACTTCAAGACTCCACCTTCTCAACTTCCCATCAAGTTTGCAGTAGTTGGAGATCTTGGACAAACGGATTGGACGACTTCGACCTTGCAGCATGTAGCTAAATCAAACTACGACATGTTGATTCTACCCGGTGACCTATCCTACGCAGACTTTATTCAACCTCTATGGGACTCCTTTGGTCGATTGGTAGAACCTTTAGCTAGCCAGCGTCCTTGGATGGTCACCCAAGGCAACCACGAAAAGGAGAAGATTCCTCTCGTTCACTCAGAGCCATTCACGGCATACAACGCCAGATGGCACATGCCCTTCGAAGAAAGTGGATCAGACTCTAACCTCTACTATTCTTTCAATGTCGCTGGCGTTCATGTCATCATGCTTGGCTCCTACGCCAAATTTCAACCTTCTTCTCCGCAATACAATTGGCTTAAATCTGACCTGCAAAAGGTTAACAGGGGAAAAACTCCCTGGGTTCTGGTGCTCATTCACGCCCCTTGGTACAACTCCAACACTGCTCATCAGGGTGAGCCTGAATCCCTTGAAATGAAAGCTTCCATGGAAGACTTGCTCTTCCAAGCCCGTGTGGATGTTGTTTTTGCAGGCCATGTTCATGCTTATGAACGCTTTACACGGGTTTATAAAGACAAAGCTAACAATTGTGGTCCAGTGCATATCACAATCGGGGACGGGGGTAACCGTGAAGGCCTTGCTAATAAGTACATAGATCCTAAGCCAGCGATATCAATGTTCAGGGAGGCTAGCTTTGGACATGGTATATTGGAAGTATTTAATGCATCTCACGCACGGTGGACATGGCATAAGAACGATAACGATGAAGCTGTTGTTAGTGATACTATCTGGCTTACGAGTTTCTCCTCCAATCCTTCTTGTAAACAGTGA 1287 0.4623 MLVQRMCMLGFLLIVGIFELDAVYGYNRPPPRQNLFIPNLDHSDLPQQVHISQVGENKMRISWITDSPTSPKVSYGPSPSANALSVTGTTSSYRYLFYKSGEIHDVVIGPLNPNTVYYYRLGDPPSSLTYNFKTPPSQLPIKFAVVGDLGQTDWTTSTLQHVAKSNYDMLILPGDLSYADFIQPLWDSFGRLVEPLASQRPWMVTQGNHEKEKIPLVHSEPFTAYNARWHMPFEESGSDSNLYYSFNVAGVHVIMLGSYAKFQPSSPQYNWLKSDLQKVNRGKTPWVLVLIHAPWYNSNTAHQGEPESLEMKASMEDLLFQARVDVVFAGHVHAYERFTRVYKDKANNCGPVHITIGDGGNREGLANKYIDPKPAISMFREASFGHGILEVFNASHARWTWHKNDNDEAVVSDTIWLTSFSSNPSCKQ 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02483 428 Gene3D - 45 137 - -
Vian2g02483 428 CDD MPP_PAPs 140 419 IPR041792 -
Vian2g02483 428 Pfam Iron/zinc purple acid phosphatase-like protein C 350 409 IPR025733 -
Vian2g02483 428 SUPERFAMILY Metallo-dependent phosphatases 140 410 IPR029052 -
Vian2g02483 428 Pfam Calcineurin-like phosphoesterase 142 335 IPR004843 GO:0016787
Vian2g02483 428 Gene3D - 138 426 IPR029052 -
Vian2g02483 428 Pfam Purple acid Phosphatase, N-terminal domain 46 134 IPR015914 GO:0003993|GO:0046872
Vian2g02483 428 PANTHER ACID PHOSPHATASE RELATED 25 418 IPR039331 GO:0003993
Vian2g02483 428 SUPERFAMILY Purple acid phosphatase, N-terminal domain 42 136 IPR008963 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02483 Vian-Chr2 45531875 45535005 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02483 46 386 Miscellaneous Gene Families AT2G03450 26.829 3.53e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02483 K22390 - gmx:100794764 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02483 2 45531875 45535005 Vian2g02483 2 45531875 45535005 ECH