Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02481 ATGAAAGAATTGCAGCGGGTCCTTGCAACACTAGCTTTTAAAAAGGATACTGAATGTGCCACATACAAGGTGCACATTTCATTGGTGGGGAAAGAGAAGATGAGGGTGTCGTGGATAACGGAAGCGAAGCATGCAGAATCCGTGGTGGAGTACGGAACAGAGTCAGGGGAATATAGCGCAAAATCAACGGGGGAGCATACCTCGTACCGATATTTTTTGTACAATTCCGGCAAGATTCACAACGTTGTTATTGGTCCTTTGAAACCAGGCACCACTTACTTCTACAGGTGTGGAGGGTCGGGCCCAGAGTTTTGTCTCAAGACACCTCCACACAACTTCCCTCTTGAATTTGTCGTCGTTGGGGACTTAGGACAAACAGAATGGAGTGCATCAACCTTGAAACATGTCGAAAGCAGGGAGTACGACGTTGCGTTGTTACCAGGAGATCTATCCTACGCAGACTCCCAACAACCCTTGTGGGACTCCTTTGGTCGTTTGGTGGAACCCTATGCCAGTAAAAGGCCATGGATGGTTACCGAAGGCAACCACGAGATCGAGATTTTCCCCATTATTTACCCACAACCCTTCCAGGCCTACAATGCTCGTTGGCCTATGCCCTTCCAACAAAGTGCTTCCACCTCAAACCTCTATTACTCCTTCCAGCTTGTTGCCACCCATGTCATCATGCTAGGTTCCTACACTGACTTTCACGCCCAATCACAACAATACAACTGGCTCCGATCTGATATCGCCAACATTGACAGGGCCAAGACACCTTGGCTCATTGTGTTGTTGCATGCACCTTGGTATAACACTAATGAGGCACACCAAGGTGAAGGTGAATCCATGAGACAAGCCATGGAAAAATTGCTTTATAATGCCCGTGTTGACTTGGTTTTTGCTGGCCATGTTCATGCCTATGAACGCTTCTGGTTAAATTCATTGCAGACTCGAATTTACGATAACAAGGTTGACTCATGTGGACCCATGTACGTGACCATTGGAGACGGAGGAAATCGAGAGGGGCTTGCGTTAATGTTTAAGAACCCTCCAAGCCCGCTCTCGTTGTATCGAGAACCAAGCTTCGGACATGGAAGGTTGAGAATAGTAAATGAAACACACGCACACTGGTCGTGGCACCGAAACAACGACACTGATGCTGTCATAGCTGATGGCGTTTGGATAGAGAGTTTAAGCAGCTCCCAAGCATGTTCGATACAACAAGATGCTCCCAACGAAGAGCTATAA 1248 0.4744 MKELQRVLATLAFKKDTECATYKVHISLVGKEKMRVSWITEAKHAESVVEYGTESGEYSAKSTGEHTSYRYFLYNSGKIHNVVIGPLKPGTTYFYRCGGSGPEFCLKTPPHNFPLEFVVVGDLGQTEWSASTLKHVESREYDVALLPGDLSYADSQQPLWDSFGRLVEPYASKRPWMVTEGNHEIEIFPIIYPQPFQAYNARWPMPFQQSASTSNLYYSFQLVATHVIMLGSYTDFHAQSQQYNWLRSDIANIDRAKTPWLIVLLHAPWYNTNEAHQGEGESMRQAMEKLLYNARVDLVFAGHVHAYERFWLNSLQTRIYDNKVDSCGPMYVTIGDGGNREGLALMFKNPPSPLSLYREPSFGHGRLRIVNETHAHWSWHRNNDTDAVIADGVWIESLSSSQACSIQQDAPNEEL 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02481 415 CDD MPP_PAPs 111 397 IPR041792 -
Vian2g02481 415 SUPERFAMILY Metallo-dependent phosphatases 115 384 IPR029052 -
Vian2g02481 415 Gene3D - 112 405 IPR029052 -
Vian2g02481 415 Pfam Purple acid Phosphatase, N-terminal domain 23 101 IPR015914 GO:0003993|GO:0046872
Vian2g02481 415 SUPERFAMILY Purple acid phosphatase, N-terminal domain 20 110 IPR008963 GO:0003993|GO:0046872
Vian2g02481 415 PANTHER ACID PHOSPHATASE RELATED 16 400 IPR039331 GO:0003993
Vian2g02481 415 Pfam Calcineurin-like phosphoesterase 117 307 IPR004843 GO:0016787
Vian2g02481 415 Pfam Iron/zinc purple acid phosphatase-like protein C 328 388 IPR025733 -
Vian2g02481 415 Gene3D - 20 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02481 Vian-Chr2 45485461 45498685 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02481 75 413 Miscellaneous Gene Families AT2G03450 27.206 1.97e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02481 K22390 - gmx:100819446 723.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02481 2 45485461 45498685 Vian2g02481 2 45485461 45498685 ECH