Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02479 ATGGCCTCGCAGGTTAACGACGCAAACGGTGCCGTCAACGGTGCCCTCGGAAACGCCGAGAAGCTTATTATCGATACCGACCCTGGGATCGATGATAGCATGGCCATTTTGATGGCTTTTCAAAGTTCCGAGGTTGACGTTCTGGGTTTGACAAGTGTCTTTGGCAATACAACTACGGAACTTTCGACACGCAATGCTTTGCTGTTGTGTGAGATCGCAGGCCGTGAAGATGTTCCAGTTGCAGAGGGCAGCTCTGGGCCATTGAAGGGTGGAACGCCTCGTGTTGCTGATTTTGTTCATGGTAAAGACGGTCTAGGGAACACACTCCTACCTTCACCTAAAGGTAAGAAAATTGAGAAGAGCGCTTGTGAGTTTTTGGTAGAGAAAGTCTCTGAATATCCTGGCGAAGTATCTGTGCTAGCACTTGGACCACTAACAAATTTGGCTTTGGCAATCAAAAGTGATTCATCGTTTGCAAGCAAAGTGAAGAGAATAGTTATACTCGGTGGTTCATTCTTTGCCTTGGGCAATGTGAACCCTGCTGCAGAAGCAAATATCTATGGAGACCCAGAAGCCGCAGACGTTGTGTTTACCTCTGGTGCAAATATTGTTGTTGTCGGAATAAACATTACAACCCAAGTCCAATTCACAGATGCTGATCTCCTTCAATTGAAAGAATCTCAAGGAAAGTATGCTCCCTTCTTGAGTGAGATATGCAAATTCTACCGGGACTGGCATGTAAAATCTGATGGTGTCCATGGAATTTTCCTCCACGATCCCGTCAGTTTTGTGGCACTTGTGCGTCCAGATCTTTTTACATACCAGAAAGGGGTTGTGAGGGTAGAGACACAAGGCATCTGTGTTGGGCATACACTTCTAGACCAAGGATTGAAAATCTGGAATACGAGCAACCCATGGACAGGTTATTCTCCTGTTTCAGTTGCTTGGACCGTGAATGTCGAGGGAGTTGTTGATTATATCAAGGAGCTGCTGATGAAAACCTGA 1005 0.4597 MASQVNDANGAVNGALGNAEKLIIDTDPGIDDSMAILMAFQSSEVDVLGLTSVFGNTTTELSTRNALLLCEIAGREDVPVAEGSSGPLKGGTPRVADFVHGKDGLGNTLLPSPKGKKIEKSACEFLVEKVSEYPGEVSVLALGPLTNLALAIKSDSSFASKVKRIVILGGSFFALGNVNPAAEANIYGDPEAADVVFTSGANIVVVGINITTQVQFTDADLLQLKESQGKYAPFLSEICKFYRDWHVKSDGVHGIFLHDPVSFVALVRPDLFTYQKGVVRVETQGICVGHTLLDQGLKIWNTSNPWTGYSPVSVAWTVNVEGVVDYIKELLMKT 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02479 334 Pfam Inosine-uridine preferring nucleoside hydrolase 22 323 IPR001910 GO:0016799
Vian2g02479 334 CDD nuc_hydro_CaPnhB 21 331 - -
Vian2g02479 334 SUPERFAMILY Nucleoside hydrolase 20 331 IPR036452 GO:0016799
Vian2g02479 334 Gene3D - 12 334 IPR036452 GO:0016799
Vian2g02479 334 PANTHER INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE 20 333 IPR023186 -
Vian2g02479 334 FunFam Probable uridine nucleosidase 1 15 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02479 Vian-Chr2 45474455 45477050 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02479 K01240 - gmx:100818908 580.482