Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02454 ATGTTCGCGGCTCATCAGCCTCGGTTTATGGTCATTGTACTTCTGTCCATCGAGATCATCACCTCGAGATGCAGTTCCACCACGCAAGAGCTTCACACCGGCTTCTCGGCCACACCAGACTCTTCAACGGCGTCGTTTCAGGCAGTTCTCAATGACTCCAGTGGAAACTTTTCTCTGGGCTTCCTCCGCGTGAACCGAAACCAGCTGGCACTAGCCATCCTCCACGTCCCATCCTCGGAGCCTTTCTGGGTGGCCAACCCAACCCGCGCAGCTTCCTGGTCCGACAACACGCGCCTCTTCTTCAACGGTAGTCTAGTGCTGTCGGACTCCGAAACGCGCCTTTCGTGGTCAACCGCCACAAACGGAGACCGTGTGGTGCTCCTCAACACCTCCAACTTGCAGGTCCAAACCCAAGGTCGTCCCCTCTGGGAGAGTTTTAACTTTCCAACAAATACCATCGTCCAGGGCCAGAATTTCACTTCCAAAATGTCTCTGTTATCCTCCAACGGATTATATTCGTTGCGGTTAGGCAGCGATTTCATGGGACTATACGAAGGAAACGGGGATTTATACTGGAAACGCACAGTACTTGAGACGAAAGCGGAAGTGCAGGAAGGTAAGGGGCCGATTTACGCCCGAGTCAACCCGGAGGGTTACCTTGGGATGTATCAGACAAACGACGAGAAACCCGCGGATGTTCAAAAGTTCAACAGCTTTCAACAGGTTGTCACAGCGGCGTCGTTTTTGTTCGTGCGGATGGAATCGGACGGGAATTTGAAAGGTTATTACTGGGACGGTTCCGAGTGGCTAATTAACTACCAGGCTATTTCTGAGACCTGCGAACTCCCCCGGTCCTGCGGTTCCTACGGTTTGTGCACGCCCGGCGAGTCTGGATGCTCCTGCTTAGATAACCAGACCCGGTTCGAAGCGGGTGGGTGTTTCAACGATGTTGGTGGAGAGTTGTGTGGGGAAGAAGGGATTGGTGGGAATAGAAACGGTTACTGGGTGCTGAGAAAGACCGGCGTGGAGCCACCGCATAAGGAGCTCCTTAGCCACGTGACGAAGTCGTCTTTGGCGGAATGCGAGGAGTTCTGCGAGAAGAACTGTAGCTGTTGGGGAGCGCTGTATAACAACGGCACCGGGTTTTGCTACATGTTGGATAGTCCAATCGGAACATTGTTGGGTAGCGGAGATGCGACAAAAGTGGGGTATTTCAAAGTTAAAAAAGGGGAACGAGAAAATAAACGGGTTTGGGTACGGGTCGGAATTGTGATTACGGTTTTGGTAATGGTTGGGATTATTATTGTTGTCTCGCCGCCCCTCCCTTTGTCTCCTCCCGCCGTCTTCCCCCGCCATGCTGAACCTCGGAGGAAACCTCCGTCCTCATCGACGCCTACCGCGACAAGTGATCCTCCCTCGGCCGCACCAACCTCAAAGCCACCCACTGGCAAGAGGTCGCCGATTCCCCCACTGCCAAAACCGCCATCCAGTGCCGCCAAAAAATGGAAAAACTCCGCAAACGCTACCGCACCGAAATCCAACGCCTCCGCTCCCTCCCTCTCCCTCGCCTCATCAACAACTCCACCACCGCTTCACCCTCCTCCTGGGTTCACTTCAAATCCGTGGATTCCATGGAAAAAGGCCCCAACAAACCCACACCGCCACCGCCACCAACCCCAACACCTCCACCAACAACCTCAATTTCCCCGACGAATTCCAACTCAATCTCTAACACAATCTAATCGCGCTGTACCTATGCATAGGAATGGAACCATCCAGTGTTTCATCAAGAGAGACAAATCTAAGCTGACATACCATCCAGTCCTGATAGTAGTGTTCGAATATGATGGTCAACTTCTTTGTTGTGGCCCACTTACAAACTTATTGTGTCGTTTTATTGAAGTTTATGAAAGTGCACGAATAAAAATTGGAGGTGCGGGAAGAAATTGCCAATGGATAATTGTAAAGCCCACAGGAAGATCCACGAAGAAATTGCCAATTCATAATTGTAAAGCCCACAGGAAGATGCACGCCAAATCTTCATTTCATGCTGTGCGCATTCCCCTATCCTCCCTCTAA 2079 0.518 MFAAHQPRFMVIVLLSIEIITSRCSSTTQELHTGFSATPDSSTASFQAVLNDSSGNFSLGFLRVNRNQLALAILHVPSSEPFWVANPTRAASWSDNTRLFFNGSLVLSDSETRLSWSTATNGDRVVLLNTSNLQVQTQGRPLWESFNFPTNTIVQGQNFTSKMSLLSSNGLYSLRLGSDFMGLYEGNGDLYWKRTVLETKAEVQEGKGPIYARVNPEGYLGMYQTNDEKPADVQKFNSFQQVVTAASFLFVRMESDGNLKGYYWDGSEWLINYQAISETCELPRSCGSYGLCTPGESGCSCLDNQTRFEAGGCFNDVGGELCGEEGIGGNRNGYWVLRKTGVEPPHKELLSHVTKSSLAECEEFCEKNCSCWGALYNNGTGFCYMLDSPIGTLLGSGDATKVGYFKVKKGERENKRVWVRVGIVITVLVMVGIIIVVSPPLPLSPPAVFPRHAEPRRKPPSSSTPTATSDPPSAAPTSKPPTGKRSPIPPLPKPPSSAAKKWKNSANATAPKSNASAPSLSLASSTTPPPLHPPPGFTSNPWIPWKKAPTNPHRHRHQPQHLHQQPQFPRRIPTQSLTQSNRAVPMHRNGTIQCFIKRDKSKLTYHPVLIVVFEYDGQLLCCGPLTNLLCRFIEVYESARIKIGGAGRNCQWIIVKPTGRSTKKLPIHNCKAHRKMHAKSSFHAVRIPLSSL 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02454 692 Pfam D-mannose binding lectin 82 163 IPR001480 -
Vian2g02454 692 MobiDBLite consensus disorder prediction 449 571 - -
Vian2g02454 692 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 151 IPR036426 -
Vian2g02454 692 SMART blect_4 41 149 IPR001480 -
Vian2g02454 692 MobiDBLite consensus disorder prediction 500 526 - -
Vian2g02454 692 MobiDBLite consensus disorder prediction 474 496 - -
Vian2g02454 692 MobiDBLite consensus disorder prediction 459 473 - -
Vian2g02454 692 ProSiteProfiles PAN/Apple domain profile. 322 409 IPR003609 -
Vian2g02454 692 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 44 437 - -
Vian2g02454 692 Pfam S-locus glycoprotein domain 244 303 IPR000858 GO:0048544
Vian2g02454 692 Pfam PAN domain 353 393 IPR003609 -
Vian2g02454 692 Gene3D - 28 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02454 Vian-Chr2 45091315 45102513 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02454 - - gmx:100814305 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02454 2 45091315 45102513 Vian2g02454 2 45091315 45102513 ECH