Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02433 ATGGGGGCCTCGCTGTCGAACCTAGGAAGCAACGGTTCGGCCGCCGCTCCGGGCCTCGGTGACATTCCGGAGAATTGCGTCGCCCGCGTTTTCCTCCACCTCACTCCGCCGGAGATTTGCAACCTAGCGCGCCTCAACCGCTCTTTTCGCGGCGCTGCCTCCGCCGATTCCGTCTGGCAAACCAAGCTGCCTACCAACTACCAAGATCTGCTCGATTTGATGCCTGCCGAGAGGTACCGGAATCTCTCCAAGAAGGACATTTTCGCGCTGCTCTCTCGTCCAGTGCCGTTCGACGACGGCAACAAGGAAGTGTGGCTGGACAGGGTCACGGGAAGGGTTTGCATGTCAATTTCGGCGAAGGCGATGTCTATTACTGGAATTGATGACCGTAGATACTGGACTTGGGTTCCTACTGAGGAATCTAGGTTCAACACTGTAGCATATTTGCAGCAAATATGGTGGTTTGAAGTGGACGGGGAGGTCAGCTTCCCATTTCCTGCTGATATTTATACTCTATCCTTTAGGCTTCACCTTGGACGATTTTCAAAGAGGCTTGGGAGACGCGTGCGCAACTATGAACACACCCATGGTTGGGACATAAAACCAGTGAAATTTGAGTTGTCAACCATGGATGGTCAGCGAGCTTCATTCGAGTGCTGCCTGGATGAAGCTGAACCTGATGATGCACACGGCAATCAAAAGTGCGGACATTGGGTAGATTACAAGGTGGGTGAGTTTATTGTCAGGGGATCAGAACCTACAACCAAAGTAAGATTCTCCATGAAACAGATTGACTGTACACACTCTAAAGGTGGGCTTTGTGTAGATTCTGTATTTATTATACCTAGTCATTTGAGAGAGCGCACCAGAAGCGGAATTCTGAAATAA 888 0.5068 MGASLSNLGSNGSAAAPGLGDIPENCVARVFLHLTPPEICNLARLNRSFRGAASADSVWQTKLPTNYQDLLDLMPAERYRNLSKKDIFALLSRPVPFDDGNKEVWLDRVTGRVCMSISAKAMSITGIDDRRYWTWVPTEESRFNTVAYLQQIWWFEVDGEVSFPFPADIYTLSFRLHLGRFSKRLGRRVRNYEHTHGWDIKPVKFELSTMDGQRASFECCLDEAEPDDAHGNQKCGHWVDYKVGEFIVRGSEPTTKVRFSMKQIDCTHSKGGLCVDSVFIIPSHLRERTRSGILK 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02433 295 Gene3D - 19 61 - -
Vian2g02433 295 Pfam Phloem protein 2 113 282 IPR025886 -
Vian2g02433 295 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
Vian2g02433 295 CDD F-box_AtSKIP3-like 19 64 - -
Vian2g02433 295 PANTHER F-BOX PROTEIN PP2-A15 6 289 - -
Vian2g02433 295 SUPERFAMILY F-box domain 15 88 IPR036047 GO:0005515
Vian2g02433 295 SMART fbox_2 22 62 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02433 Vian-Chr2 44825120 44830726 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02433 - - gmx:100807328 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02433 2 44825120 44830726 Vian2g02433 2 44825120 44830726 ECH