Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02424 ATGAAGATCCTCCAGAAAGATTTCGCCCTCAACCAAACCGGAACTGCGAAGCTCATGGCTGAAGAACCCGACGACGTGTGGGTCCTCTACAACCTCATCCTCCCCGGCGACGTCGTTTCAGCCGACACCACGCGCAAGGTTCACCACGATTCCTCCACCAAGAAAAACACAGCATCACGTGTCAAACTCACCCTCCACCTCAAAGTCACGTGCCGAGACTTCCACAAAGACTCCTCCACCCTCCGCCTCCAAGGCCGCAACCTCCAGCACAACCAACACGTCGCCGCAGGCTCCTTCCACACGCTCTCTCTCGAACCCAACAAACCCTTCCTCCTCCGAAAAAATCTCTGGCAAAACGACGCCGTCCAAACCCTCAACGACACCACCCGAAAAGAATGTTCCAAATCAAATTCCACTTCCATTCCCGACCTTGCCGTCGTTCTTTTCCACCCGCACCGCGCTGAGATCCACCTCGTCGCAGAAGGAGACAACACGCACTGCACCAAGGTCGAAGCCTGTCCCAACTCCAGGAAAAACGGAAAAGTTTCTTCGGCCGTGTTTTTCCGCCGAGTGTTGGCGGCTTTGGTGAAGCGCGTGGATTTCAAGGTTTTGAGGGGCGTGGTGGTGACGAGCGAGGAGTTTCGTGCGTTTGCGGTGTCGGAAGCGAGGAAGATGGGGATACGGTGGATCGAGGATAACAAGACGAGCGTGGCGGTCGTGGAGGATGGTGATAGTTTGGAGAAAGTTTTGAGTGACCCGGCGGTGACGGCGTTGGTGAAGGACAGCAGGGTTAGGGCGTTTAGGGAGTTGTGGGAGATGGTGTGCAACGATTCGGGCCGCGCGTGTTATGGAGCCGAGGAGGTGGAGCGTGCGAAAGAAATGAAAGCGATTGAGACACTTTTGATTACGGATGATCTTTACAGGAACGAGGAAGTTGGTACGAGGCAGAAATACGATGGTCTGGTGAAATCGGTAAAAGACGGTGGAGGAAAGGCTTTGGTGTATTCGCCGATGCATGTTTCGGCGTCGCAACTGTCGCAGCTCACCGGCGTTGCCGCCATTCTCCGGTTTCCCTTGCCTGATCTCGAAGTCCAAGATTGA 1101 0.5504 MKILQKDFALNQTGTAKLMAEEPDDVWVLYNLILPGDVVSADTTRKVHHDSSTKKNTASRVKLTLHLKVTCRDFHKDSSTLRLQGRNLQHNQHVAAGSFHTLSLEPNKPFLLRKNLWQNDAVQTLNDTTRKECSKSNSTSIPDLAVVLFHPHRAEIHLVAEGDNTHCTKVEACPNSRKNGKVSSAVFFRRVLAALVKRVDFKVLRGVVVTSEEFRAFAVSEARKMGIRWIEDNKTSVAVVEDGDSLEKVLSDPAVTALVKDSRVRAFRELWEMVCNDSGRACYGAEEVERAKEMKAIETLLITDDLYRNEEVGTRQKYDGLVKSVKDGGGKALVYSPMHVSASQLSQLTGVAAILRFPLPDLEVQD 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02424 366 SMART eRF1_1_2 1 130 IPR005140 -
Vian2g02424 366 Pfam eRF1 domain 1 1 127 IPR005140 -
Vian2g02424 366 SUPERFAMILY L30e-like 264 363 IPR029064 -
Vian2g02424 366 SUPERFAMILY Translational machinery components 142 263 - -
Vian2g02424 366 FunFam Protein pelota homolog 1 131 - -
Vian2g02424 366 PANTHER PELOTA 1 363 IPR004405 GO:0070481|GO:0070966|GO:0071025
Vian2g02424 366 Gene3D - 263 366 IPR029064 -
Vian2g02424 366 Pfam eRF1 domain 3 266 359 IPR005142 -
Vian2g02424 366 SUPERFAMILY Dom34/Pelota N-terminal domain-like 1 128 IPR038069 -
Vian2g02424 366 FunFam Protein pelota homolog 260 366 - -
Vian2g02424 366 Gene3D Pelota, domain A 1 131 IPR038069 -
Vian2g02424 366 Gene3D eRF1 domain 2 143 262 IPR042226 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02424 Vian-Chr2 44724581 44725681 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02424 K06965 - gmx:100803618 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02424 2 44724581 44725681 Vian2g02424 2 44724581 44725681 ECH