Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02401 ATGTCTGGCCCCGTGGCCATAGCAGATTATTCAAATGGAGGAGCACTTTCTTTTACAGAGAGAACGAAATCTGTTGATGTGCTTGATGAATTAGACCAACCTTCTACGCTGACAAACGGTGAAAGTGATGGCTTTACTGTTGGGCAACTCTTACTTTCTAATGGAGAGTCATATTCTGGGTCCCTTTATGGCAATGTTTCTGAGGGCTATGGGACATACGTTTGGTGTGATGGTTGTGTATATGAGGGTGAATGGAGGAGAGGGATGAGAAATGGTTATGGGAAGATCAGATGGCCTTCTGGAGCAGTGTATGAAGGTGATTTCTCCGGTGGCTATATCCATGGCACGGGGACATATATTCGTTCTGATAAATTGACCTATAAAGGTAGATGGCGGTTGAATCTTAAACATGGTTTGGGGTATGAAGTTTATCCTAATGGAGATACCTTTGAAGGTTCTTGGATGCAAGGAACACCAGAGGGCCCTGGCAAGTATACCTGGGCCAATGGAAATGTTTATGTGGGGAATATGAAAGGTGGGATAATGTCTGGGAAAGGAACACTCACCTGGATAAATGGGGACTCGTACGAAGGAAACTGGTTAAATGGCATGATGCATGGATTTGGAGTTTACACTTGGAGTGATGGAGGAAGCTATGTTGGGACTTGGGCATTTGGTCTAAAAGATGGCAAAGGAACCTTTTACCCAAGAGGTAGCCGGCTTCCATCAATGCAAGAAATTTATCTCAGTGCCTTGAGAAAAAGAGGGCTATTGCCAGATTTGAGAAAACAGACGCAAGTGAGAGATGTCAAGGTACCAGAAAACCAGCTGTCAAGTCATGTTTCATCTGATAATCTTGCAAAAGGAAACCTGTTAAATCTGGAACAGTCTAATAGAAGAAATGTGTCTCTTGAAAGACGTTGGAGTCTTGAGGTGTCGATTGAGAAAGTGATTGGATATGATTCAGCATTAGGATTAGCAGATTCTGTGCCAGAAAGTAGCGACAAAGAGGTTGATACAATGATCCCAATTTTGGAACGAGAGTACATGCAAGGTGTATTGATAAGTGAGGTTGTGTTAAATAATATGTTTTCATCAATGTCTAGAAGGGCAAGGCGACTTAAAAAAAAGCTTGCCAAAGAGATTAAAAAACCTGGTGAAATAATCATTAAAGGTCACAGGAGTTATGATCTAATGCTCTGTTTGCAGCTTGGAATAAGGTATACCGTGGGCAAGATAACACCTATACCTACGCGAGAAGTAAGAATATCAGATTTTGGTACCAAAGCAAGCTTTTGGATGAATTTTCCTAAAGAAGGTTCTCAGTTAACACCTACCCATCCATCAGAGGATTTTAAATGGAAAGATTACTGCCCCATGGTGTTCAGAAATTTGAGAGAATTATTCAAGATTGACGCTGCCGACTACATGATGTCCATTTGTGGAAACGATACTCTGAGGGAACTATCTTCTCCAGGGAAAAGTGGCAGTGTCTTTTTCCTGTCTCAGGATGATCGTTTCATGATCAAGACATTGCGAATGTCTGAAGTGAAGGTTCTTCTAAGAATGCTGCCAGACTATCATCATCATGTGAAGACATACGAAAATACACTTATCACAAAATTCTTTGGCTTGCACAGGATTAAGGCTTCAAGTGGTCAAAAGTTTCGCTTCGTTGTAATGGGAAATATGTTCTGCACGGAACTGAGGATCCATCGGAGATTTGATTTAAAAGGTTCTTCCTTTGGACGATCATCAGACAAGATAGAAATTGACGAAAATACAACACTAAAGGATTTGGATCTGAACTACTGTTTCTACTTGGAACCGTCTTGGCGGGAGTCTTTATTAAAGCAGATTGAAATAGACAGCAAATTTTTAGAAGCACAACACATTATGGATTACAGCCTTCTTCTAGGTGTTCACTATCGAGCTCCACAGCATCTGCGTCCTCTCATATCATACAACCAAAGTAGAAGTGTGGATGGATTAGCAATGCTTGCAGAGGAAGATCCTCTGGAGGATGAAGCATCCTATCCACAAGGTCTTGTTCTAGTTCCTAGAGGAGCAGATGATAACAGTGTTGTTGTGGGCTCACATGTGAGGGGTAGTCGGTTGCGGGCTTCATCTGCTGGTGATGAGGAGGTGGATCTACTTCTACCTGGTACAGCAAGACTCCAAATCCAGCTTGGTGTGAACATGCCTTCAAGGGCAGAGCAGATTTCGGATAAACAAGAAAAACCAAAGTTCCAGGAGGTCTACGATGTGGTGCTGTACCTGGGTATCATTGATATATTGCAGGACTATAACATGACCAAGAAGATTGAACATGCTTATAAATCTCTTCAGTTTGATTCATTGTCTATCTCAGCTGTGGACCCTACATTCTACTCTCGTCGTTTCCTGGAGTTTATTCAAAAAGTGTTTCCACCAAATCCAATGGCAGGTGGATAA 2454 0.4189 MSGPVAIADYSNGGALSFTERTKSVDVLDELDQPSTLTNGESDGFTVGQLLLSNGESYSGSLYGNVSEGYGTYVWCDGCVYEGEWRRGMRNGYGKIRWPSGAVYEGDFSGGYIHGTGTYIRSDKLTYKGRWRLNLKHGLGYEVYPNGDTFEGSWMQGTPEGPGKYTWANGNVYVGNMKGGIMSGKGTLTWINGDSYEGNWLNGMMHGFGVYTWSDGGSYVGTWAFGLKDGKGTFYPRGSRLPSMQEIYLSALRKRGLLPDLRKQTQVRDVKVPENQLSSHVSSDNLAKGNLLNLEQSNRRNVSLERRWSLEVSIEKVIGYDSALGLADSVPESSDKEVDTMIPILEREYMQGVLISEVVLNNMFSSMSRRARRLKKKLAKEIKKPGEIIIKGHRSYDLMLCLQLGIRYTVGKITPIPTREVRISDFGTKASFWMNFPKEGSQLTPTHPSEDFKWKDYCPMVFRNLRELFKIDAADYMMSICGNDTLRELSSPGKSGSVFFLSQDDRFMIKTLRMSEVKVLLRMLPDYHHHVKTYENTLITKFFGLHRIKASSGQKFRFVVMGNMFCTELRIHRRFDLKGSSFGRSSDKIEIDENTTLKDLDLNYCFYLEPSWRESLLKQIEIDSKFLEAQHIMDYSLLLGVHYRAPQHLRPLISYNQSRSVDGLAMLAEEDPLEDEASYPQGLVLVPRGADDNSVVVGSHVRGSRLRASSAGDEEVDLLLPGTARLQIQLGVNMPSRAEQISDKQEKPKFQEVYDVVLYLGIIDILQDYNMTKKIEHAYKSLQFDSLSISAVDPTFYSRRFLEFIQKVFPPNPMAGG 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02401 817 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 167 238 - -
Vian2g02401 817 FunFam Phosphatidylinositol 4-phosphate 5-kinase 381 563 - -
Vian2g02401 817 Pfam MORN repeat 104 123 IPR003409 -
Vian2g02401 817 Pfam MORN repeat 58 80 IPR003409 -
Vian2g02401 817 Pfam MORN repeat 150 172 IPR003409 -
Vian2g02401 817 Pfam MORN repeat 127 149 IPR003409 -
Vian2g02401 817 Pfam MORN repeat 219 240 IPR003409 -
Vian2g02401 817 Pfam MORN repeat 173 194 IPR003409 -
Vian2g02401 817 Pfam MORN repeat 81 102 IPR003409 -
Vian2g02401 817 Pfam MORN repeat 196 217 IPR003409 -
Vian2g02401 817 SMART PIPK_2 422 810 IPR002498 GO:0016307|GO:0046488
Vian2g02401 817 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 68 809 IPR023610 -
Vian2g02401 817 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 381 563 IPR027484 -
Vian2g02401 817 CDD PIPKc_AtPIP5K_like 395 808 - -
Vian2g02401 817 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 53 180 - -
Vian2g02401 817 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 392 809 IPR002498 GO:0016307|GO:0046488
Vian2g02401 817 PIRSF PIP5K_plant 15 813 IPR017163 GO:0005524|GO:0016308
Vian2g02401 817 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 481 807 IPR002498 GO:0016307|GO:0046488
Vian2g02401 817 SMART morn 171 192 IPR003409 -
Vian2g02401 817 SMART morn 79 100 IPR003409 -
Vian2g02401 817 SMART morn 217 238 IPR003409 -
Vian2g02401 817 SMART morn 102 123 IPR003409 -
Vian2g02401 817 SMART morn 194 215 IPR003409 -
Vian2g02401 817 SMART morn 125 146 IPR003409 -
Vian2g02401 817 SMART morn 56 77 IPR003409 -
Vian2g02401 817 SMART morn 148 169 IPR003409 -
Vian2g02401 817 Gene3D - 564 809 - -
Vian2g02401 817 Gene3D - 60 113 - -
Vian2g02401 817 Gene3D - 152 201 - -
Vian2g02401 817 Gene3D - 202 243 - -
Vian2g02401 817 SUPERFAMILY SAICAR synthase-like 391 809 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02401 Vian-Chr2 44471937 44477513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02401 14 812 Acyl Lipid Metabolism Gene Families AT3G09920 73.243 0.0 1206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02401 K00889 - gmx:100800418 1484.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02401 2 44471937 44477513 Vian2g02401 2 44471937 44477513 ECH
Vian2g02401 2 44471937 44477513 Vian3g02064 3 26591965 26608327 PCT