Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02365 ATGAAAAAAGTTATGAACAAAAAAAGTTTATTTGTTTACTCTGAACAGGCTCGTAGTATATACCAAAAGGTGCTTGTGATCAAGTCCGTGACAGATACTTCTCCAGAGAACCGGACTGCTGTCTTTGACATGAGCTATCACACTCTTGTTATGGATGAAACCCAATTGGGAGGATTTGCACGGCTGAAAAATTCTGAGGGACAAGAAATTCCTTCAATCCATAAGTTGAAATATGCATTGATGAGCGTGGATGTAGAGTTGATCGTGAAAGAAGTTAAAGGGATAGATGCAAACAAGCATATTGTTTTCAAAATTCAGATTTCCATACAAGTATTGTTACTTGTTGAACCTAGATTCAATCGTGAAGGACTTGTTATGGAGCCATTGAACACCAAAGGGTATATTATTTTGGATGCGGATGACCCCAATGATGTCTACGGGTTGGAGGATGGAGGGGATGTCCGTTCTGGGTGCATTGAGGGATTGGCTAAAGAGTATCAAAATAATGCTCAAGCAAATCTTCATATGAAAAATAAAAAAGGTGGCAAGGAAGTTGTATGTTCCAATTGCTTGGGTGGTGGAGTACTTTTAGAAATTGTGCATTTTGGTGGGCATGGTGACAATGATTCAATTTGCTGTTATGAGTGGCTTGTCAAATGGACCGGTCTTGGTTATGATAATGCCACATGGGAGTTACAAGATGCTTCGTTTTTGACATCAGCGAAAGGCAGGAAACTCATTCGTGATTATGAAAGTCGTCGAAAGGGAGTTGATAAACTGTCAAAAAGACATTTTGAAGACAATGAGGAGACAAAAACTTTCATTGTCGAATTGTCAGTGTTGCCGTTTGGAGATTCACCAGGACTTTATAACCAATATTTGAGTTATGTGAACAAGCTTCGCATGTGTTGGTACAAAGGCCAAAATGCTCTTATTGTAGATGATCAAATTGACCAGGACTTACATGAACTAAGATGCATTCCATGGAAAGCGATAATAATTGATGAATGCCAGCAATCCAGAATTTCAGGACACTTGGACCATATCAAGACTTTAAACACTGAAATGAAGCTCCTTCTTGTTAGTGGACAAATAAAGCTTGAACAGTATTGTTCAATGCTGCTTTCAAACTTAATTTTGTTATGCTCAGGCCAGAAGTCCGACACACTTGGTGCGCTCCATGAGCTTATTATCTCAACAAGGAAGTGCTGTGACCACCCTTATCTCCTGGAGCCGGCACTGCATAATTCTGTTGCTAAGGGTCTACCTGTTGAAGAACATCTAGATATTGGCATAAAAGCAAGCGGAAAACTGCTACTTCTTGAAAAAATTCTTTTGGAAGCAAAAAGTCGTGGGTTAAGGGTGTTAATATTGTTCCAGTCATCTTGTGGTTCTGGATCGATTGGAGATATTTTGGATGATGTTCTCTGTCAGAGATTTGGTATAGATTGCTATGTGCGATATGATAGAGCTTATACCCCTAAAACAAAGGAAGCTGCTTTAGACACATTTAATGATAGAGACAGTGGTAAATTTGTCTTCTTGATGGAAAACCGTGCTTGTCTCCCTAGTGTTAAGCTTTCTTCAGTGGACATTGTTATATTGTTTGACAGTGATTTTGACCCACAAAATGACCTAAGAGGTTTACAAAGGATGTCTATCAGCACACAGTTGAAACAATTAACCGTTTTCAGATTGTACTCATATTACACTGTTGAAGAAAAGATTTTAATGCTTGCAAAGGAGGGTATATCACTTGACAGTAACGTGCGGTTGATTAGTCATAGTATTTCTCACACTCTTCTAAAATGGGGCACCTCTCATCTGTTCAATAAGCTGGATGATTTACATGCCAGTGTAACTGCTGTTTCTACTCCAGACATTGCAGATCAAACTCTTCTGCATGATGTACTCTGTGAATTATCATCCCAATTGGTTTGTGATGCTGATGATATTGATTGTCATGAATTGTCATTCATATCAACAATACAGCAGAATGGAGGGGAATATTCGAGGAACATTTTATTGCTAGGAGAAAGAATAATGAAGGAACTGGGCAGTGAGCCAAGTGCTTTTTCCTGGAGTGATCTTGAAGCAAAGTATCCTCAATGGAAATTTTTGTCTGTTTCGTCTCAGAGGATGAGGAGTAGGGTCAAACATTCTGATTACATAATAAATGAATCTGAATGTGAAGGTCATACAATTATGGGAAAGAGGACAGCATCGAATGCTTCCAAGAAGAGTAAAGTGTCCAAGGATAATTTTGATCATAATTTGAGGAAGCTGGCCAAGGATAAAGTTGAGCCCGAGAGGAGGAAAGTATCCAAAGACATTGTTGAAACAGAGGGGATGGAACCGTCAAATCATGCCATTGATCCTAAGACTAGGAAGGTGTTCAATGGTATTGTTAAATCTGGTGGCAGGAAAATGTCCAAGAAAATTCGTGATTCCAAATATCGGAAATCAAGATTGAGGAACAAGAAGAATTCAAGTGTTTCCAATAGTACTAGTAAATCAAATGGTACAAATGGTTTGTCTAGTCTACTTGATTCCTCAGGGCATCCTTTGGCCAATGAAACTACGGGAGAAACTACTACAAACATTCAACTTTCAGAGAAAAGGAAACTGCTTGATGGACCAAATAGTATCAAATTCTTGCCAAAGTCGGATATTTCAGGTCTTTGTGAAATTCTACATTTTCCGTGTTGGCTAGCAGCTTCTTTGTTGAAACATGACATTGATAAGAAGGTTTCACTCACTCTAGCAAAACTGTACTTGAATTTCAATTGCAATGAAGAGGAAGCCACCAATGTCTACTCAGAACTTTGGAAACATGCAAAGACAATATCTAATTATATACAAAATGGACTGTGTGTTGAGAACTATAGTATAAATGACATGCCCGAGCTGAATGATTTGACCAAGGTGAAGCAGAAGGGTTTTCTGGATACTCGTGTTACAAAACTCACGAAATCTGTCACAAAAGAACATGATCTTCAAATGAAATCTCCCACAACAGTGGTTTCATGTGACCAGACTTCTACTTATGAAATTTGTTCATTTCCAAAGACACCCGCTAGTTTTCCTGTGAAAGCAATTGCTCTCTCCTCGGAGTCTGGCTCAGAAAACGACGTCATGGAATCTACACCCTTAATAACTTCAGAAGATTCAGCTCTTGAGCACGGGGGCAATGATGTCAACCCTCGTACTGATTATTTGGAAAAACAGAGTCCTATTAGAAGTACAGATATTACACAATCTGATGGCAAAGTTTTTGAAGATCCTCAAATTTTAGTGAATGAATTGGTTGCTATTGAGAATTTTATGAATATGCCTATTCATTCTTTGCAGCTTGACAGTGATGATGCAAATGCGGTAACTTCTATTGGTTCTGCTGTTCCCGAGGCCAGACAGTGGGGCAGTATAATGAGTCCTGTATGTGATGAGTCAACTGGTCCGAAGTTTGCTGAGACAACCTTTCCAAATACACAACCATCGGATGCTAATTTGTGGTCGTTGCCTCTGATGGCAATGTCTGATATTCCATCTTTTCCGGAGCACAATTCAGCTAGTGCTGTCACGCCTCTAGATGATATTTTTAATCATAGTCGTGAAGATCATTGTTACATTCACGAGGCTGAAGTAATATTGGAAGCACCAAACAACACTGTGGAACCAGTTAACTCTTCCTTTGGTTCACCTGTGATACTGAAACCCTTCACAAGTGTGCCCATGAATGAAAATATGACACATGTACCTGACAGCTTTACTATTCCTGGATATATGAACAGTGATTCTATTCAACATCACTACGTGGCATCTGAAATATCCGACGATGTCTATCTAGACTCACTACTGGATGAAATGGAGATAACAGAGAACACAAATGAAGAAGCCTTCATAGATCCACTACTAATTGCAATGGAGAGAATAGAGAAGGATAAAGAAGAAGCCTTCAAGATACATGAGAAGAAGATATTGCAGCTCCGATCTGAATATGAATTGGAAGTTGAAAAATTGAGTGAAAAGTACAGGATTTTGCTTCAGAATGTTGATACTGAAGTAGCACTCAAAAAAATGGAATTTGAGACACAATGTAAATTAGTGTCAAGCAAATCCAAGGCCGGAATTCACCAACCCAGAGGGAATACCCAGTTCTCATCAAGTCCACTCAAAATTAACCCATCTTTGTTGACTCCTACTGTGATGGTCTTGGACAATCCTTGGCCATCCAGAAGAAATCATGGTCATTTCTCGGACAAGACAGCCATTCCAGAAGAAATCAACCCCCTAAGAGCACGCTTTGATCCCATGATTCAGTTGTGCAAGATTTCCCATGATGGCTATGGTGTACTTGTCCCCTCTGCAGCTGCTTCATCTTATGCAGCAATTTCCCTTGACATTATGTACAATTGCAACCTTAGTATCATTTAG 4434 0.3926 MKKVMNKKSLFVYSEQARSIYQKVLVIKSVTDTSPENRTAVFDMSYHTLVMDETQLGGFARLKNSEGQEIPSIHKLKYALMSVDVELIVKEVKGIDANKHIVFKIQISIQVLLLVEPRFNREGLVMEPLNTKGYIILDADDPNDVYGLEDGGDVRSGCIEGLAKEYQNNAQANLHMKNKKGGKEVVCSNCLGGGVLLEIVHFGGHGDNDSICCYEWLVKWTGLGYDNATWELQDASFLTSAKGRKLIRDYESRRKGVDKLSKRHFEDNEETKTFIVELSVLPFGDSPGLYNQYLSYVNKLRMCWYKGQNALIVDDQIDQDLHELRCIPWKAIIIDECQQSRISGHLDHIKTLNTEMKLLLVSGQIKLEQYCSMLLSNLILLCSGQKSDTLGALHELIISTRKCCDHPYLLEPALHNSVAKGLPVEEHLDIGIKASGKLLLLEKILLEAKSRGLRVLILFQSSCGSGSIGDILDDVLCQRFGIDCYVRYDRAYTPKTKEAALDTFNDRDSGKFVFLMENRACLPSVKLSSVDIVILFDSDFDPQNDLRGLQRMSISTQLKQLTVFRLYSYYTVEEKILMLAKEGISLDSNVRLISHSISHTLLKWGTSHLFNKLDDLHASVTAVSTPDIADQTLLHDVLCELSSQLVCDADDIDCHELSFISTIQQNGGEYSRNILLLGERIMKELGSEPSAFSWSDLEAKYPQWKFLSVSSQRMRSRVKHSDYIINESECEGHTIMGKRTASNASKKSKVSKDNFDHNLRKLAKDKVEPERRKVSKDIVETEGMEPSNHAIDPKTRKVFNGIVKSGGRKMSKKIRDSKYRKSRLRNKKNSSVSNSTSKSNGTNGLSSLLDSSGHPLANETTGETTTNIQLSEKRKLLDGPNSIKFLPKSDISGLCEILHFPCWLAASLLKHDIDKKVSLTLAKLYLNFNCNEEEATNVYSELWKHAKTISNYIQNGLCVENYSINDMPELNDLTKVKQKGFLDTRVTKLTKSVTKEHDLQMKSPTTVVSCDQTSTYEICSFPKTPASFPVKAIALSSESGSENDVMESTPLITSEDSALEHGGNDVNPRTDYLEKQSPIRSTDITQSDGKVFEDPQILVNELVAIENFMNMPIHSLQLDSDDANAVTSIGSAVPEARQWGSIMSPVCDESTGPKFAETTFPNTQPSDANLWSLPLMAMSDIPSFPEHNSASAVTPLDDIFNHSREDHCYIHEAEVILEAPNNTVEPVNSSFGSPVILKPFTSVPMNENMTHVPDSFTIPGYMNSDSIQHHYVASEISDDVYLDSLLDEMEITENTNEEAFIDPLLIAMERIEKDKEEAFKIHEKKILQLRSEYELEVEKLSEKYRILLQNVDTEVALKKMEFETQCKLVSSKSKAGIHQPRGNTQFSSSPLKINPSLLTPTVMVLDNPWPSRRNHGHFSDKTAIPEEINPLRARFDPMIQLCKISHDGYGVLVPSAAASSYAAISLDIMYNCNLSII 1477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02365 1477 Gene3D - 202 253 - -
Vian2g02365 1477 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 440 605 IPR001650 -
Vian2g02365 1477 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 204 316 - -
Vian2g02365 1477 MobiDBLite consensus disorder prediction 811 827 - -
Vian2g02365 1477 Coils Coil 1323 1350 - -
Vian2g02365 1477 Gene3D - 1300 1374 - -
Vian2g02365 1477 MobiDBLite consensus disorder prediction 828 872 - -
Vian2g02365 1477 Gene3D - 366 587 IPR027417 -
Vian2g02365 1477 MobiDBLite consensus disorder prediction 762 873 - -
Vian2g02365 1477 MobiDBLite consensus disorder prediction 762 792 - -
Vian2g02365 1477 SUPERFAMILY Chromo domain-like 213 253 IPR016197 -
Vian2g02365 1477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 328 587 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02365 Vian-Chr2 44046323 44085237 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02365 - K11643 gmx:100813574 1245.72