Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02351 ATGAACACATCCAACGGCATCATGACACAGTCGTCTTCGTCGGGAGCGACACAGTCGCCCGGGCTCAAAACCTATTTCAAAACTCCCGAGGGAAGATATAAGCTTCAATACGAGAAGACTCACCCTTCCGGTCTTCTTCATTACGCCCATGGAAAAACCGTTACTCAGGTAACCCTGGCACATCTCAAGGACAAGCCGGCACCGTCTACACCAACTGCGTCGTCCTCAAGTTTCAGTGCCAGCAGTGGGGTACGGTCTGCGGCAGCTAGATTATTGGGAGGAAGCAACGGAAGCCGGGCACTTAGTTTTGTTGGAGGCAACGGTAGTAGCAAGAATAATGGAGGAAACAGTAGGATTGGTTCCATTGGAGCCTCCAGTACAAGTAGTTCAATGGCTAATCCAAATTTTGATGGGAAAGGCACGTACCTGATATTCAACGTCGGTGATGCAATTTTCATTAGCGATTTGAATTCTCAAGACAAGGACCCAATAAAGTCTATTCACTTCAGTAACTCGAATCCAGTGTGCCATGCGTTTGATCAGGATTCTAAGGATGGGCATGATTTGCTCATTGGTTTGAACTCTGGCGATGTCTACTCAGTGTCACTGAGACAGCAATTACAGGATGTTGGTAAAAAGCTTGTTGGGGCCCTCCATTACAACAAAGACGGTTCAGTCAATAACAGTCGTTGTACATGCATTGCTTGGGTGCCTGGAGGTGATGGTGCTTTTGTTGTTTCTCATTCTGATGGTAATTTGTACGTGTATGAGAAGAACAAAGATGGTGCGGGTGATTCTTCTTTTCCAGTTGTAAAAGATCAAACTCAATTTTCTGTTGCTCATGCACGTTACAGTAAGAGTAATCCGATAGCCAGATGGCATATATGCCAGGGTTCAATTAACAGTATTTCTTTCTCAATGGATGGAGCACACTTGGCAACTGTTGGACGAGATGGTTATTTGCGAGTTTTTTATTACTCAAAAGAACAACTTATCTGTGGCGGGAAAAGTTATTACGGTGCTTTGTTATGCTGTGCGTGGAGCATGGATGGAAAATATATTTTGACGGGAGGGGAAGATGATTTAGTTCAAGTTTGGAGCATGGAAGATCGGAAGGTTGTGGCATGGGGTGAGGGACATGGCTCGTGGGTCAGTGGAGTTGCTTTCGATTCATATTGGTCATCACCAAATTCAAATGACAATGGAGAGACCGTTATGTATCGTTTTGGTTCTGTTGGTCAGGATACACAATTGCTTCTATGGGACCTGGAAATGGACGAAATCGTGGTGCCATTGAGGCGGCCAGCTGGTGGATCCCCAACTTACAGTACTGGAAGCCAGTCATCACACTGGGACAATGTGGTCCCATTGGGTACCTTGCAACCTGCTCCGAGTATGCGGGATGTTCCAAAAATATCTCCGTTGGTTGCTCACCGTGTGCATACTGAACCACTCTCTGGCTTGATATTTACCCAGGAATCTGTGCTCACTGCCTGTCGGGAGGGTCACATTAAAGTCTGGATGAGGCCAGGTGTTGCTGCTGACACCCAATCAACCAACTCTGAAAACTTGTTAGCTACCACTCTCAAAGACAAGCCTTCACTCTCAACCAAGATCACCAATTCTCCCTACAAACAATGA 1641 0.4607 MNTSNGIMTQSSSSGATQSPGLKTYFKTPEGRYKLQYEKTHPSGLLHYAHGKTVTQVTLAHLKDKPAPSTPTASSSSFSASSGVRSAAARLLGGSNGSRALSFVGGNGSSKNNGGNSRIGSIGASSTSSSMANPNFDGKGTYLIFNVGDAIFISDLNSQDKDPIKSIHFSNSNPVCHAFDQDSKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGALHYNKDGSVNNSRCTCIAWVPGGDGAFVVSHSDGNLYVYEKNKDGAGDSSFPVVKDQTQFSVAHARYSKSNPIARWHICQGSINSISFSMDGAHLATVGRDGYLRVFYYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHGSWVSGVAFDSYWSSPNSNDNGETVMYRFGSVGQDTQLLLWDLEMDEIVVPLRRPAGGSPTYSTGSQSSHWDNVVPLGTLQPAPSMRDVPKISPLVAHRVHTEPLSGLIFTQESVLTACREGHIKVWMRPGVAADTQSTNSENLLATTLKDKPSLSTKITNSPYKQ 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02351 546 MobiDBLite consensus disorder prediction 106 130 - -
Vian2g02351 546 ProSiteProfiles Trp-Asp (WD) repeats profile. 335 376 IPR001680 GO:0005515
Vian2g02351 546 SMART WD40_4 471 508 IPR001680 GO:0005515
Vian2g02351 546 SMART WD40_4 328 367 IPR001680 GO:0005515
Vian2g02351 546 SMART WD40_4 370 422 IPR001680 GO:0005515
Vian2g02351 546 SMART WD40_4 211 257 IPR001680 GO:0005515
Vian2g02351 546 SMART WD40_4 286 325 IPR001680 GO:0005515
Vian2g02351 546 Gene3D - 11 516 IPR015943 GO:0005515
Vian2g02351 546 Pfam WD domain, G-beta repeat 342 367 IPR001680 GO:0005515
Vian2g02351 546 Pfam WD domain, G-beta repeat 297 324 IPR001680 GO:0005515
Vian2g02351 546 PANTHER WD REPEAT PROTEIN 11 523 - -
Vian2g02351 546 MobiDBLite consensus disorder prediction 1 25 - -
Vian2g02351 546 SUPERFAMILY WD40 repeat-like 149 507 IPR036322 GO:0005515
Vian2g02351 546 MobiDBLite consensus disorder prediction 1 24 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02351 K24741 - gmx:100782580 973.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02351 2 43873048 43878423 Vian2g02351 2 43873048 43878423 ECH