Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02350 ATGGCAAAGTTTTTCCATTTCCTCCTTCTTCTCTTCATCCAAACAATCTCAGCCCAAGTAGCACCGACACCAGCAGGACCCACCAACATCACCCAGGTGCTAGAGAAAGCAGGACAATTCACAACCTTCATCAAACTTCTCAAAGCCACACAAACAGCTGACAGACTCAACTCACAGCTCAACAACTCAAACCAAGGCCTAACCTTGTTTGCACCCACTGACAATGCATTCTCAAGCCTAAAAGCAGGAACACTAAACTCCATAAACTCACAAGACCAAATGCAGTTGGTGCAGTTCCACATCCTCCCCACTCTCTACTCCATCTCACAGTTCCAAACCGCCAGCAACCCTTTACACACACAAGCCGGGAACAGCGACGACGGAGAGTACCCTCTGAACGTCACCACCTCCGGGAACCAAGTGAATCTAACAACTGGGGTGATTGACACAACAGTGTCCAACACTATATTCAGTGATAACCAGCTTGCGGTGTATCAGGTCGATAAGGTGCTTCTTCCTATGGCACTTTTTGGCTCGACGGCTCCGGCGGCAGCACCGGCGGAGGCTCCGGCGCCAACCAAGCCGGAGAAGAATGTCCGAGCAGGGGCAGCTGATTCTCCATCAGGGTCTTCGGACTCGTCCGCTGATGCTTCGAGTGCAGTGAGTTTGAAAAGGAAGACAGTTGAAGTTGTTACCTTTGTTGTTGCCGTTATTGCCGTTTCTTGTTTCTGA 732 0.5027 MAKFFHFLLLLFIQTISAQVAPTPAGPTNITQVLEKAGQFTTFIKLLKATQTADRLNSQLNNSNQGLTLFAPTDNAFSSLKAGTLNSINSQDQMQLVQFHILPTLYSISQFQTASNPLHTQAGNSDDGEYPLNVTTSGNQVNLTTGVIDTTVSNTIFSDNQLAVYQVDKVLLPMALFGSTAPAAAPAEAPAPTKPEKNVRAGAADSPSGSSDSSADASSAVSLKRKTVEVVTFVVAVIAVSCF 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02350 243 SMART fasc_3 68 174 IPR000782 -
Vian2g02350 243 Gene3D FAS1 domain 13 174 IPR036378 -
Vian2g02350 243 ProSiteProfiles FAS1/BIgH3 domain profile. 27 171 IPR000782 -
Vian2g02350 243 MobiDBLite consensus disorder prediction 184 216 - -
Vian2g02350 243 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 235 IPR045003 -
Vian2g02350 243 SUPERFAMILY FAS1 domain 26 173 IPR036378 -
Vian2g02350 243 Pfam Fasciclin domain 39 173 IPR000782 -
Vian2g02350 243 FunFam Fasciclin-like arabinogalactan protein 11 10 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02350 Vian-Chr2 43863751 43864482 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02350 - - pvu:PHAVU_001G176400g 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02350 2 43863751 43864482 Vian2g02350 2 43863751 43864482 ECH